Enterococcus raffinosus: J9537_00215
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Entry
J9537_00215 CDS
T07517
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K03491
probable licABCH operon transcriptional regulator
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eraf03000
]
J9537_00215
Transcription factors [BR:
eraf03000
]
Prokaryotic type
Other transcription factors
BglG family
J9537_00215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mga
HTH_11
PRD
PTS_EIIA_2
HTH_Mga
HTH_DeoR
HTH_24
HTH_IclR
SMC_ScpB
PuR_N
Fe_dep_repress
HTH_Crp_2
HTH_10
DUF1670
PTS_IIB
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QXJ59251
LinkDB
All DBs
Position
44596..46437
Genome browser
AA seq
613 aa
AA seq
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MALINRWYQLLQHFITHDRLSLNELQKITDTSAQTTKKAIQLLNDQMEQIAVIEEKDTSY
SLKVMDSQQFSEIMNGSLKQQTDFNSSTKRIAVLIDCFMKQEGYIVIDDLSEVLGVSRST
VNKDLRNLKQLMTRYQISLIGTPNKGLKIAGTESQLRLLYLHHAYDYLEQPPLTEDLLQS
IDEIALSKKLDFRTLGLLQKTINLTIQRIRSGKPLVQAVAYYVNYFSDDSLLEELFVNLA
TDYHLTISKFDFDFLCFPLNIFNNNLVPEDQADTPEVKTLFDYMMNQINEAVIINLDQEE
LFRNMRAHFMFLINRLIFQVETYDIFREEFKQKHAFAHELAEIGIAALANYLQKPFQRAE
LSYLAIYFELALKLDTQPKMKEIAVVCNTGKGTALMIKRQLATVLGPNIRIAHYSEEEYE
TKDLDRYFAVFTTVPLKHTKTTTAIIKLTDLFNENWLLSEWKRIVASKAATFEHIQFSFE
QLDKQLAYEENLILLLEKLRVQQLIDDSFRDYILTKAQEESAIIDNGIAFPHGINRQSEE
ILVTIGIYPDGCSTEDIELIFMVAIPENLTLAVEEELLSFYDTIFVISSSETLREQVKQI
QTKEEYRQLLVNG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcattaatcaatcgctggtatcaattattacagcattttattactcatgatcggctg
agtttgaatgaattgcagaaaataaccgatacaagtgcacaaaccaccaaaaaagcgatt
caattattgaatgatcaaatggaacaaattgcggtgattgaggaaaaagacacgagctac
tcgttaaaagtgatggattcgcaacagttttcggaaatcatgaacggtagcttaaagcag
caaacagatttcaattctagcacaaagcggattgccgtcttaatcgattgtttcatgaag
caagagggttacatcgtcattgatgatttatcagaagtgttaggagtcagtcgttcaacg
gttaataaggatttacgaaacttaaaacagttgatgaccagatatcaaatttctttgatt
ggtacacccaataaaggcttgaagatcgcaggtacagaatcccaattgcggctgctctac
ctgcaccatgcctatgattatttggaacagcctccgttaacagaggatttactgcagtcc
attgacgaaatcgcactaagtaaaaaattagattttcggacattaggcttattacaaaag
acgatcaatttaacaattcaacggattcgatccgggaagccattggtacaggcagttgct
tattatgttaattatttttctgacgacagtttattggaagaattatttgttaatttggca
accgattatcatttgacgatcagtaaatttgattttgattttctctgctttcccttaaat
attttcaacaataatttggttccagaggatcaagcagatacaccagaagtaaaaacctta
tttgattacatgatgaatcaaatcaatgaagccgtgatcatcaatttagatcaagaagag
ttgtttcgaaatatgcgtgctcattttatgtttttgattaatcgccttatttttcaagtt
gaaacttatgatatctttcgtgaagagtttaaacaaaaacatgcttttgcccatgagcta
gcggaaataggaatcgctgcattagccaattatctacagaaaccttttcagagagccgaa
ctttcatacttagcgatctattttgaattggcgttgaaactagatactcaacctaaaatg
aaagagatcgccgtagtctgcaacactggtaaaggaacggctttaatgatcaagcgtcag
ctggcaaccgttttaggaccgaatattcgaatcgctcattattcagaggaagaatatgag
acaaaggacttggatcgctatttcgcagtatttaccacagtgcccttgaagcatacgaag
acaacaacagccatcataaaactgactgatttgtttaatgagaactggttattgagtgaa
tggaaacgaattgttgcttccaaggcagcaacttttgagcatattcagttttcttttgaa
caattggataagcagttggcttatgaagagaatttgatccttttattggaaaagctgcga
gtccaacaattaatcgatgattcttttagagactacattttgacgaaggctcaagaagag
tcagcaatcatcgataatggcattgcctttcctcatggaattaatcggcagagtgaggaa
attcttgtgacgatcggaatttatccagatgggtgttctacagaagatattgagttgatt
tttatggtagcgattccagaaaatctgactttagcagtggaggaagagctgttaagtttt
tatgacacgatttttgttatctcctccagtgaaacgttaagagaacaggtgaagcagatt
caaactaaagaagaatatcgtcagttattggtaaatggataa
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