Enterococcus raffinosus: J9537_01465
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Entry
J9537_01465 CDS
T07517
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eraf
Enterococcus raffinosus
Pathway
eraf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J9537_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eraf03021
]
J9537_01465
03400 DNA repair and recombination proteins [BR:
eraf03400
]
J9537_01465
Enzymes [BR:
eraf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J9537_01465
Transcription machinery [BR:
eraf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J9537_01465
DNA repair and recombination proteins [BR:
eraf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J9537_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TUTase
DUF4843
Motif
Other DBs
NCBI-ProteinID:
QXJ59486
LinkDB
All DBs
Position
260776..261714
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPRITKIDEDRDYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVL
HEFSTIKGVREDVVQIILNIKGLALKLFAEEEKTLEIDITGPATVTAGDIIVDSDVEILN
KDMYICTVAEGATFHARLTVKPGRGYVQADENKKEDMPIGVLPVDSIYTPVRKVNYQVEN
TRVGRRDDFDKLTMEIWTDGSIIAQEALSLAAKILTEHLDIFVNLTDEAKNAEIMVEKEE
TQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEEVKAK
LHDLGLGLRKDD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattcgaaaaaccaagaatcacaaaaattgatgaagacagagattatggcaag
ttcgttgttgaacctttggaaagaggttatggaactactttaggtaattctctacgtcgt
attctactttcttctttaccaggcgctgccattaccaatattcaaatcgatggggtgtta
cacgaattttcaaccatcaaaggtgtaagagaagacgttgtacaaatcatcttgaatatc
aaaggtttggctttgaaattattcgctgaagaagaaaaaacccttgagatcgatattact
ggaccagctacggtaactgccggcgatattattgttgacagtgacgttgaaatcttgaat
aaagatatgtacatttgtactgttgctgaaggagcgacattccatgctcgcttaacagta
aaacctggtcgaggctatgttcaagcagacgaaaataaaaaggaagacatgccaattggt
gtccttccagtcgattctatttacacaccagtacgtaaagtaaactaccaagttgaaaat
acacgtgttggccgtcgtgatgacttcgataaattaacgatggaaatttggactgatgga
tcaatcattgctcaagaagcattgagtcttgcagcgaaaattttgactgaacatttagat
atttttgtaaatcttactgatgaagcgaaaaacgctgaaatcatggttgaaaaagaagaa
acgcaaaaagaaaaaatgttagaaatgaccatcgaagaactagacttgtctgtacgttcg
tacaattgcttgaaacgtgctggaattaatacggttcaagaattaacgaataagtctgaa
cctgaaatgatcaaagttcgtaatttgggtcgtaaatcacttgaagaagtgaaggctaaa
ttgcatgatcttggtttaggattacgtaaagacgattaa
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