Enterococcus raffinosus: J9537_02210
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Entry
J9537_02210 CDS
T07517
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eraf
Enterococcus raffinosus
Pathway
eraf03420
Nucleotide excision repair
eraf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J9537_02210
03430 Mismatch repair
J9537_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eraf03400
]
J9537_02210
Enzymes [BR:
eraf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J9537_02210
DNA repair and recombination proteins [BR:
eraf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J9537_02210
MMR (mismatch excision repair)
Other MMR factors
J9537_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
AAA_14
Methyltransf_30
Motif
Other DBs
NCBI-ProteinID:
QXJ59629
LinkDB
All DBs
Position
442247..444394
Genome browser
AA seq
715 aa
AA seq
DB search
MFTKLSNYIKSDLIEAERDTLDDKDTLQQLIAQNNGHSFSEDQLAAIRFPMQTHLRIIAG
AGSGKTQTICAKAAYLVLEKSVDPKAIMMCTFSRKAKLEMEARVNHYLGGYARVKVQTFH
GWFNAEYNELLRKNPDLKQWGIEGQIDEDQYYQVANHLIKKYHLYNFDKLEDRTIASRIS
YWRNMGYSDQEMVGFVAKYFDGQELLLNQKLSEVFQQFLTELALTKKTQHFITFDDMLFN
LKLILENDRTARQTLQEKYRYIFIDEFQDINPLQKQIVALICPPDKEVMQKNSSKLIIVG
DDDQSIYYFRGAEPSYIKTFEQEYKQTSLKLMTNYRSDAPIVEAGNRLIRFNAHDRLEKT
MTASKTTTAHDCYGIGFPDDEDEAAWIGQKIQKLASEAPLEDGSPDYRGTMVLYPTRVQL
RSLLKQLKKHKVPFVTPSNDDLLGIFGLPLFKTLFQQLEMLASATAIQQKNDALKKIIQQ
YAFFHFIKFNSSAKFSDELFSKNKFKINDLVAFLVSERNLSPSSQDHAKVFFKEMYFFYQ
QGRLNLTALADALLATPKFKKDLSEEEADWLHKELSAAGDWPGLLEAFQQASQQNEGMKK
RLRDYDQEKLNAVYLLSIHASKGLGKKNIFIKGVYQDALPNHHTVKKADCDLQKAREEGA
PPTTLEEQRRLMYVAITRAKENLYVTYPKTVNNKTIEPSPFLKEAGLPLKEYRKK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaaagctttcaaattacataaaatcagatttaatcgaagcagaacgagatacg
ctggatgataaagatactttgcagcaattaattgcgcagaataatggtcattcttttagt
gaagatcaattagcggcgattcgttttccaatgcagacgcatttacggattatcgctggt
gcaggaagcggcaagactcaaacaatttgtgccaaagcggcttatttagtattagaaaaa
tcagtagatccaaaggcaatcatgatgtgtactttttcgcgtaaggcaaagttagagatg
gaagcgcgagtcaatcattatttaggcggctatgctcgtgtcaaagtacaaacatttcat
ggctggttcaacgcggagtacaatgagttgctgcggaagaatcccgacctgaaacagtgg
gggattgaagggcaaatcgatgaagatcaatattatcaagtggcgaatcacttaataaaa
aaatatcatttatacaattttgacaagcttgaagatcgaacgattgcctctcgcattagc
tattggcgaaacatggggtattcggatcaggagatggttggatttgtcgccaagtatttt
gatgggcaggagcttcttctgaatcaaaaattaagtgaagtttttcagcagtttttaact
gagctggcgttgacaaaaaagacgcagcactttattacttttgacgatatgttgtttaat
ctgaaattgattttagaaaacgacagaacagcccggcaaacgctgcaggagaaataccgt
tacatttttattgatgagtttcaggatatcaacccgttacaaaaacagattgtggcgttg
atctgtccgccagataaggaagtcatgcagaaaaattccagtaagctgattattgttggg
gatgatgaccaaagtatttactactttcgcggggcggagccgagttatattaagacgttt
gaacaagagtacaaacaaacgtctctgaaattaatgactaactatcgttcagatgcaccg
atcgtagaagcaggcaatcgcttgattcgttttaatgcccatgatcgattggaaaaaacg
atgactgctagtaaaacaacgactgctcatgattgttatggcattggttttcctgatgat
gaggatgaggccgcttggatcggacaaaaaatacagaagttagccagtgaagctccgctg
gaggatggcagccctgattatcgtggtacgatggtcttgtatccgacacgggtacagctg
cgttccctgttgaaacaattaaaaaaacacaaggtaccttttgttacaccgtctaacgat
gacttgttggggatttttggattgccgttgtttaagacgctctttcagcaattagaaatg
ttggcctcggcgacagcaatccaacaaaaaaatgacgcactgaagaaaatcattcagcaa
tatgccttttttcatttcatcaaatttaattctagtgcaaaatttagcgacgaactgttt
agtaaaaacaagtttaagattaatgatctagttgcttttttagtcagtgaacgaaatctt
tctccatcatcgcaagatcatgcaaaagtgttttttaaggaaatgtactttttttatcaa
cagggtaggctaaatcttacggcattagcagatgcgctgctggcaacacccaaattcaaa
aaggatttgagtgaagaagaggcagattggttgcataaagagttgtctgcagcaggagat
tggccagggcttctagaagcttttcaacaggctagtcagcaaaacgaaggtatgaaaaaa
agactgcgtgactatgatcaggaaaaattaaatgccgtttatttattgtcgatccatgcc
agtaaaggcttaggcaagaaaaacatctttattaaaggtgtttatcaagacgcgttacca
aaccatcacacagtaaagaaagccgactgtgatttgcaaaaggcaagagaggaaggcgct
ccaccgacaacgttagaggagcaacgccgattgatgtatgtggctattacacgtgcaaag
gaaaatctttatgttacctatccaaaaactgtcaacaataaaaccattgaaccctcgccg
tttttaaaagaagcaggattgccactcaaagagtatcgaaaaaaatag
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