Enterococcus raffinosus: J9537_02290
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Entry
J9537_02290 CDS
T07517
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eraf03000
]
J9537_02290
Transcription factors [BR:
eraf03000
]
Prokaryotic type
Helix-turn-helix
Other families
J9537_02290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA_5
AAA_22
Sigma54_activ_2
AAA
AAA_2
Mg_chelatase
NACHT
AAA_16
RNA_helicase
MarR_2
RuvB_N
nSTAND3
AAA_7
AAA_24
ABC_tran
AAA_18
TrmB
Zf-C2H2_ZNF451_1st
Motif
Other DBs
NCBI-ProteinID:
QXJ59644
LinkDB
All DBs
Position
458781..461600
Genome browser
AA seq
939 aa
AA seq
DB search
MRIDTIFECLYEFHQQNEGTLKNLNGCTVKDICESTGYARTAVSEDLSRLTARHQVIKVK
SRPVLFFARSVLEKSFFFSPQKDEYASINELESEIRHEVEKRELIKQEFRKNPFSKVIGY
DGSLADSIKKLKAAVLYPPKGLNIMLTGESGVGKTLLAENLHRFFEAKMEKKVPFIYFNC
AEYFNNPELLTSHLFGYKKGSFTGADSDHQGLVELADGGFFFLDEVHRLTNEGQEKLFTL
LDKGYFTRMGEAEKQRHVSIKFIFATTEELEKTFLKTFLRRIPVNLHIPSLSERSIKEKI
QLILTFFMEESQGIQKDISISYNTLKYLVFSKYKANVGELKSEIQFICAQAYLDAIDYET
QELTIDLPISMLDENAVDTKEIVVLNEYVPSRGIKIQHDYFYSHVEQLLQVKDQQNDRFY
NFLLKEYADLKNVNISSKDAVAIMQNKMDQLYDMDLFNHSFSKEHDIDEQFYDQIHQIIH
YIEQELATLLTENLRNVLAAHIYSSIFYSAQIHEEFFDLTKNIFSGKIENYQLAEKIVLY
IENHFSLKLPNTEIIFYDLFIRKVKSADRRYELDEKCGIVVVAHGSATASSMVEYTNVLF
STSLMNSVNMPINQSVEETLDKVRQVVRKNKYSKLILMVDIGSLIYFGNVISKEFQIEVL
LISNINLLTLLEVAREVIYESTNFDYLLPVLKEKNHKALICRKGNFEDSKVLVISCLTGL
GTALKIEKLLLNTFPQELLTNVRIITLEKKELENLSRLLSFVHEDEKLVGIIGTVKTEIP
DIPFVSLDNLLSDQGIRLVFQMLGFDLSKDENQAVLKKVSAKYIQGLSIEAITDLLSILN
PKSITIELSKIYSDICMQTKKKSDEKRLLRFIIHCACVIERQIQHPEYDHTSYELSYREL
PELASVIKMAFRPIEVSYNVIIPPLEVKYIYELLFEVNV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgatacgatttttgaatgtctttatgaatttcaccaacaaaatgaaggaact
ttgaaaaatttaaacgggtgtacagtcaaggacatctgtgaatcaaccggttatgcacgc
actgcagtcagtgaggatttatcaagattaacggcccgtcatcaagtgatcaaggtgaaa
tcacgaccagttttattctttgcacgttctgttttagaaaaatcattctttttttctcct
cagaaagatgaatacgcttcaattaatgaattagaatcggaaattcgtcatgaagttgag
aaaagggagctaataaaacaagaatttcgaaagaaccctttttcaaaagtaattggttat
gacggcagtcttgcggatagcataaaaaaactgaaggcggctgtcttgtatccgccgaaa
ggtttaaatatcatgttgactggtgaatccggtgtggggaaaacactgttggcggagaat
ttacatagattttttgaagcaaagatggaaaaaaaggttccttttatctatttcaactgt
gcggagtattttaacaatccagaattattaacgtctcatttgtttgggtacaaaaaaggc
agcttcactggagcagatagtgatcatcaaggattagttgagctagcagatggcggtttt
ttctttttagatgaggttcatcggctgacgaatgagggacaagaaaaactttttacttta
ttggataagggatattttactcggatgggagaagcggagaagcagcgccatgtctcgata
aaatttatctttgcgaccaccgaagagttagaaaaaacgtttttaaaaacctttttacgg
cgtataccagtaaacttacatattcccagcttatctgaacgctcgattaaagaaaagatt
caattgattcttactttttttatggaagaaagtcaggggattcaaaaagacatctccatt
tcttataacacattaaaatatttggtgttctcgaaatacaaagccaacgttggtgaattg
aagtcagaaattcaatttatttgtgcgcaggcctatttggacgcaattgattacgaaact
caggaactgacaattgatttgccaataagtatgttggatgagaatgccgtagatacgaag
gaaattgttgtattgaatgagtatgttcctagcaggggaataaagatccagcatgattat
ttttattctcacgtagaacaactgcttcaagtcaaagatcagcaaaatgatcgtttctat
aatttcctactaaaagaatacgcggatttgaaaaacgtgaatatctcttcgaaagatgct
gtagcgatcatgcaaaataaaatggatcagttgtatgatatggatttatttaaccattcc
ttttcaaaagagcacgacatcgatgaacaattttatgatcagattcatcaaattattcac
tatattgagcaggaactggcaacacttctaacagaaaatttgcggaatgttttggcagct
catatttattccagcattttttattccgctcaaatccatgaagagttctttgatctgaca
aaaaatattttttcagggaaaatagaaaattatcaattggcggaaaaaattgttttgtac
attgagaaccatttttctttaaagctgcccaatacggaaattattttttatgatttgttt
attcgcaaggttaagtccgcagatcgccgttatgagctggatgaaaagtgcggcattgtc
gtagttgcacatgggagtgctactgcgtctagtatggtggaatatacaaatgttttgttt
tccacgagcttaatgaactcagtaaatatgccaattaaccaatcggtagaagaaacgcta
gataaagtccggcaggttgttcgtaaaaataagtatagcaagttgattttgatggtagat
atcggatcattaatctatttcggcaatgtaattagtaaagaatttcaaattgaagtcctt
ttaatcagcaatatcaatttgcttacgttgcttgaagtcgcaagagaagtgatctatgaa
tccaccaattttgactacttattgccagtgttgaaagaaaagaatcataaggcgcttatt
tgtcgaaaaggaaattttgaggactccaaggtcttggtcatttcttgtctgacaggatta
ggaacagcattgaagatcgaaaagcttttactcaatacgttcccgcaagagctgctaact
aatgttagaataattaccctcgaaaaaaaagaattggaaaatctcagccgcttgctctct
tttgttcatgaagatgagaagctggtgggaattattggaactgtgaaaacggagattcct
gatattccattcgtttcattggataatttactttcagatcaaggaattcgattagtgttt
caaatgttaggttttgatttatcgaaagatgagaatcaagccgtattgaaaaaagtctcg
gcaaaatatatccaaggtttatcaatcgaggcgattacagatcttttaagtattttgaat
ccgaaaagcattacgattgagttatccaaaatttattcggatatttgtatgcagacgaaa
aagaaaagtgatgaaaagcgtctcttgagattcatcattcattgcgcctgtgtgatcgaa
cggcagatccagcatccggaatacgaccatacttcctacgaactgtcatatcgcgagctg
ccagaattggcatctgtcataaaaatggccttccgtcctatcgaagtgtcatacaatgtc
atcattccgccgcttgaagtgaaatatatttatgagctgctgtttgaagtcaatgtgtaa
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