Enterococcus raffinosus: J9537_07060
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Entry
J9537_07060 CDS
T07517
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eraf03000
]
J9537_07060
Transcription factors [BR:
eraf03000
]
Prokaryotic type
Helix-turn-helix
Other families
J9537_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_5
AAA
PRD
EIIA-man
Sigma54_activ_2
AAA_22
Mg_chelatase
AAA_16
HTH_40
AAA_2
NACHT
AAA_14
RuvB_N
AAA_7
AAA_19
AAA_33
BrxC_BrxD
nSTAND3
HTH_11
DUF3086
Motif
Other DBs
NCBI-ProteinID:
QXJ60523
LinkDB
All DBs
Position
1435226..1437955
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AA seq
909 aa
AA seq
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MKKELDDYLYELTMNLKEGSEEAFSAYKIAESLQLNRSTISSYLNQAFREGELIKIKSYP
VLFLHRRALENASIQIDKAEYESIKELFAQDRGNAIEEIIGANGSLKEAIDQIKTAVLYP
HNGLPILLMGVSGSGKTFLAEKIYEYAKEQQVIESNAPFIAYNCAQYFNNPELLSSALFG
HTKGAFTGADHEHNGLIEKADGGILFLDEVHRLSEEGQEKLFTFMDTGEFSPMGDTSIRR
KANVRLIFATTENVYSAFLPTFLRRLPVIVTLPKFQNRPQSERLRLIDSFFISESSILDK
ELQVSYQMIDFLLNSDLEGNVGKIKNIIKYACGNAYVHQKNSQTIFVRLKDLPLEYNLKF
KEQFSKPKKKMSDRTYLPNTTQQIHLESKETQLLRNFFDEVVSEFKKVQKKESQPQEFIE
DTVSRVTRMMDEFIFQGTYEKEESLYSVLTYHIRQTLDMMYENYGFEQDGNRVVSLASYL
YLKDNTDILDSDYGWQEQKNELMEFLDSFLETPFWYAKKLLSYLSQQLDQRLLDEDIVFV
TFYFYSLQISDLPNDVKCIVLAHGYSTASSLANVVNRMLGKNVFQAYDMPINITLDKVET
QIIRYINDYRTDSGLILLVDMGSFNQLGERLSNHIKSPLVIIDNVSTPLVLEVGEHIVNG
NSVTEVCEAITVENRIQKQLIIPEVNKKKAIITCCYTGIGSATQIQEILQKCLGDSAKEL
TILPYDYKKLAENKMYETPFQLYDVLMIVGTENPKINQVPYIGLDQLINGEAVSEFAELL
HEQVDIDSEAFKSQLIFNFSINKIVENLTILDATKVLRLVQKAVKELEKLMGIEFSNNQL
FLLYMHCCSMIERILRKESVDEQADIKEYVQKEGHNMELIHQAFQEVEKEYTIELPLLEL
RLLNDIVKD
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaactggatgactatttatatgagttaacgatgaatctcaaagaaggatca
gaagaggcgttttcagcttataagattgctgaatcactgcaactcaatcgtagtaccatc
agcagttatttgaatcaagcatttcgtgagggagaactgataaagataaaaagctatcct
gttttgtttttacatagaagagcattagaaaacgcttctattcagatagacaaagcggag
tacgaatcgatcaaggaattatttgcacaagatcgtgggaatgccattgaagaaatcatc
ggtgcgaatggcagcttgaaggaagcgatcgatcaaatcaagacggctgtcttgtatcct
cataacggattaccgattctattgatgggtgtaagcggttcaggaaaaacttttttggca
gaaaaaatttatgaatacgccaaggaacaacaggtgatagaatcaaatgctccatttatc
gcctataattgtgctcaatactttaataatccagagctattatcctccgcgttgtttgga
catacaaaaggagccttcacaggagcggaccatgagcataatggactgattgaaaaggca
gatggcggcatcttatttttagatgaagttcatcgcttatctgaagaagggcaagagaag
ctgtttaccttcatggatacaggcgaattttcacccatgggagacaccagtattcgaaga
aaagcgaatgtccgcttgatttttgcaacgacggagaacgtttattccgctttcttaccc
acctttttgaggcgtttaccagttattgttaccttacccaaatttcaaaatcggccgcaa
tctgagcggctgcgcttgatcgattccttctttatttcagaaagcagcattttggataag
gagctgcaggtttcttatcaaatgattgatttcttgctaaatagtgatttagaaggaaat
gtcgggaaaatcaagaatatcatcaaatacgcctgtggaaatgcctatgtgcatcagaag
aatagtcagacgatctttgttcggttaaaggatctgccactagagtacaatctgaaattc
aaagaacagtttagtaaaccaaagaagaaaatgtcagatcgcacatacctacccaacacg
actcagcaaattcacttggaaagcaaagagacacaactgcttcgtaatttttttgatgaa
gtcgtatcagaatttaaaaaggtccagaaaaaagagagtcagccgcaagaattcattgag
gatactgttagtcgtgtgacacgaatgatggacgaatttatttttcaaggaacgtatgaa
aaggaagagtctttatattccgtgctgacttatcatattcgacaaacactggatatgatg
tatgagaactatggatttgaacaggatggcaatcgggttgtttctttagcaagctatctt
tatctaaaggataatacagatattttagatagtgattatggctggcaggaacaaaaaaat
gagctgatggaattcctggattcatttttagaaacgccattttggtatgctaaaaagcta
ttgagctatttatcccagcagttggatcagcgattattggatgaagatattgtttttgtg
accttttatttttatagtttacagatcagcgacctgccgaatgacgtaaaatgtatcgta
ctagcccatggctattcgacggccagcagtttggcgaatgtcgtgaatcggatgttaggg
aaaaatgtgtttcaggcctatgatatgcccatcaatatcaccttagacaaggttgaaaca
cagattattcgttatatcaatgattatcgtacagattcaggattgatcctactagtagat
atgggttccttcaatcaattgggggaacgtctttcaaatcatattaagagtcctttggtt
attattgataatgtcagtacaccgcttgtattggaagtcggagaacatattgttaacggc
aacagtgtcaccgaagtttgtgaggcgattactgtcgaaaaccgtatacaaaagcaactg
atcatcccagaggtaaataagaaaaaagcgatcattacctgctgttatacaggaatagga
agcgccactcaaatccaagaaatcctacagaagtgcttaggtgattctgcaaaggaattg
accatcctgccttatgactataaaaaattagctgagaataaaatgtatgagactccattt
cagctgtatgatgtcttgatgatcgttgggacagaaaacccgaaaatcaatcaagtccca
tacattggtttggatcaattaatcaacggagaagccgtttcagaatttgcggaactattg
catgaacaagtcgacattgatagtgaagccttcaagagtcaattgatttttaatttctca
attaacaagatcgtagaaaatttaacgatccttgatgcaacgaaagttttgagattggta
caaaaggctgtcaaagaactcgaaaaactaatggggatcgaattttcaaacaatcaattg
ttcttgctttacatgcactgctgctcaatgatcgaacgtattttacgcaaagaaagtgta
gatgaacaagcagatatcaaagaatatgttcaaaaagagggacataatatggagttgatc
catcaagcatttcaagaggttgagaaggaatatacgattgagcttcctttgttagagctt
cgcttactaaatgatattgtgaaggactag
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