Enterococcus raffinosus: J9537_07265
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Entry
J9537_07265 CDS
T07517
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eraf03400
]
J9537_07265 (addA)
Enzymes [BR:
eraf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J9537_07265 (addA)
DNA repair and recombination proteins [BR:
eraf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J9537_07265 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_16
AAA_22
AAA_30
MiaE_2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QXJ60562
LinkDB
All DBs
Position
1470804..1474487
Genome browser
AA seq
1227 aa
AA seq
DB search
MTTNFPIPPKAPNEMYTDAQWQAIFDQGTNLLVSASAGSGKTAVLVRRVIEKIKRQQLSV
DQLLVVTFTEAAASEMKERIQSALQEAINEETDQTLKNHFTRQLTLLPMANISTLHSFCS
KVIQRFFYLIDLDPSYRMLTDDTETILLKEDVWDELRESFYEENQEIFYRLTENFSNDRS
DSGLEDLIFSMYDFARANPAPFHWLEGLIENYRVEDLSESDLYRKLIRPQVLNTLREISQ
TYHWMIRASEGTEELKKITDLAQNELGIVKQIEQAIVEDHLIDAFKIFETMKFPAYPSPR
KKEVKELYGDIIVECKNYRDQAKQGLTKLKELYFAVSPEEQVTRMQEALPLVEELVRVEK
RFIEEYSAKKREKGMLDFNDLEHFTLQILQTEIDGHKPAESYYQKRFAEVLVDEYQDINQ
LQETILRQLSTENPGNLFMVGDVKQSIYGFRLADPTLFIQKYHDFADEEGGRRIILAENF
RSRKEVLDFTNLIFTQLMDQAVGQIEYDKQAELINGFTGFPETDSFSPELLVYKKNGEAP
EWIEDKAMGEIFMTATKIRSLIDQKFEIYDKKQKAMRPLQYEDIVLLTPTRSNNLTILEV
FKQLGIPLSINDTQNYFQSTELRVMISLLQIIDNPYQDIPLAAVLRSPIVGLQEEELAQV
RLALPQKDYYQAVKSYLQNNKDATAEKLTIFLAQLNEWREFARREALADLLIKIYNETAY
LDYVLGMPAGQQRHANLLALIERAKDYERSSFRGLYQFIRFIEKMQEKDKDLGEPPTEEL
QDAVRVMTIHGSKGLEFPVVFLMDMSKSFNVQDTRRNYVFDERLGLGVKLLTPDTRIRKD
TLLFQTVKQKNLNKLLSEEMRKLYVALTRAEQKLFLVGSYDDEEAAYKTWSKSALNENVV
LDAGLREGQNDSFFDWVGMTLFRHPDMENYQKEYAVTQPALLKQHPAAFKLDFIDPQTIA
EAVQSYLPEIKTLEIPQGSINIQSLKERLLFKYPYPEATKTTSYQSVSELKRLYDDPDNR
ETLEQTPTPVGTHYRFTENELGEPKFLGTKKEVSATEIGTATHLIMQLLPLHEKPQREIV
ESLISELVSRQTLTKEIAEKISIDSIMNFLGSDIGKFVIQYSDRLHREEPFAMLLPANQL
FNDYQNQDEILIHGIIDGYLEFEDKLFMYDLKTDYFTAGREQQLVNRYRGQINLYKNALE
KAKQKPVEAAYLIFLQGNKAVDLLKTP
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgacaactaattttcctatccctccaaaagcaccaaatgaaatgtataccgatgctcag
tggcaggcgatttttgatcaaggaacgaatcttttagtctctgcatctgctggatctgga
aaaacggcggtgcttgttcgacgggtgattgaaaaaattaagcgacaacagctttcagtc
gatcagcttcttgttgtgacatttaccgaagctgctgctagtgaaatgaaagagcgaatc
cagtccgcattacaagaagcaatcaatgaagagacggatcagacattaaaaaatcatttc
acccgtcaattaacattgttaccaatggcgaatatttcaaccttacattcattttgctca
aaggttattcaacgctttttctatttgattgatttagatccaagctatcgaatgttaacg
gatgatactgaaaccattttgttgaaagaagatgtttgggatgagctgcgagaatctttt
tatgaagaaaatcaggaaattttttatcgattaacagaaaatttctcaaatgatcgcagt
gatagcggactagaagatttaatcttttcaatgtatgattttgctcgcgcgaatcctgcg
ccttttcattggctagagggtttgattgaaaattatcgcgtagaagatttgtcagaatca
gatttgtatcgtaaattgattcgccctcaagtattgaatacactcagagaaatcagccag
acatatcattggatgattcgtgcgagtgaaggaacggaagaattaaaaaaaattactgat
ttggcccagaatgaattagggatcgtcaaacagattgaacaggcaatagttgaagaccat
ttaattgatgcgtttaagatctttgagacgatgaaattcccagcctatccttcaccaaga
aaaaaagaggtcaaggagctttatggcgatattattgttgagtgcaaaaattatcgtgac
caagcaaagcaaggattgacaaagctcaaagagctgtattttgctgtctcaccggaagaa
caggtaacacgaatgcaagaagcactgccacttgtagaagaactggttcgagttgaaaaa
cgatttattgaggagtactcagccaaaaaaagagaaaagggcatgcttgactttaatgat
ttagagcattttaccctgcagattttgcaaacggaaatagatggacacaaaccggctgaa
agttattatcagaagcgatttgctgaggttttagtggatgaatatcaagacatcaatcag
ctgcaggaaactattttacgtcaattaagtactgaaaatcctggaaatctctttatggtt
ggagatgtgaagcaatcaatttatgggtttcgtttagcagaccctaccttgttcattcag
aagtatcatgattttgccgatgaagaaggcggtcgtcgaattattctagctgaaaacttc
cgttcacgcaaagaagtgttggattttacgaatttgatcttcactcaattaatggatcag
gcggttggacaaattgaatacgataagcaagcagaattgatcaatggttttactggattt
cccgagaccgattctttctctccggagctgttggtttataaaaaaaatggagaagctcct
gaatggattgaagataaagcaatgggcgagatcttcatgactgctactaagattcgctca
ttgatagatcagaagttcgaaatttatgataaaaagcaaaaagccatgcgccccttacag
tacgaggacatcgtattattgacgcctactagaagtaataatttaacgattttagaagtc
tttaaacaattagggattcccctatctattaatgatacacaaaattattttcaatcaact
gaattgcgggtgatgatttccttattgcagatcatcgataatccgtatcaagatattcct
ttagccgccgttttacgatcaccaatcgttggcttgcaggaagaagagctggcacaggtt
cgtctagctttaccgcaaaaggactattatcaagcggttaaaagctatctgcaaaacaat
aaggatgcgacagcagaaaaattgacgatctttttggcccaattgaatgaatggcgtgag
tttgctcgaagagaagcgttagcagacttactaattaaaatctataacgagaccgcttat
ttggactatgttttagggatgcctgctggacaacagcgacatgccaacctgttagcacta
atcgaacgtgcaaaggattatgaacgcagtagtttccgaggattgtatcaatttattcgt
tttattgaaaaaatgcaggaaaaagacaaggacctgggagaaccgccaacagaagagctg
caggatgcggtacgagtaatgacaattcatggcagtaaaggtctagaatttccagtagtc
tttttgatggatatgagcaaaagctttaatgtacaggatacgcgaagaaactatgtcttt
gacgaacgtttaggattaggtgtgaaactattgactcccgatacaaggattagaaaagat
acacttttgttccaaacggtgaagcagaaaaatttgaacaagctgttgtcagaagaaatg
agaaaactttacgtagctttgactcgtgcagagcaaaagttgtttctagttggttcttat
gatgatgaagaagcagcctataaaacttggagtaaaagtgctctaaatgaaaacgtggta
cttgatgcagggctccgagagggtcaaaacgatagcttctttgattgggttggaatgact
ctatttagacacccagatatggaaaactatcagaaggaatatgcggtaactcagcctgct
cttttgaagcagcatccggcagcttttaagctagattttattgatccacaaacaatagcg
gaagctgtacaaagctatctgccagagattaaaacgttggaaatccctcaaggatctatc
aacatccaatcgttgaaagagcgcttgctgtttaaatacccgtatcctgaggcgactaaa
acaacgagttatcaatctgtatcggagctaaagcgattatacgatgaccctgacaatcga
gagacgttggagcagactccaacacctgtaggaacccactatcgattcactgaaaacgag
ctaggcgaacccaaatttctagggacaaaaaaagaagtctctgccaccgaaatagggaca
gccactcacctaatcatgcaattgctgccgttacatgaaaaaccacaacgagaaatagtt
gagtctctaatttctgagttagtttcacggcagaccttgactaaggaaatagcggaaaaa
atatcgattgactctattatgaattttcttggttctgatatcggtaaatttgtgattcaa
tattctgatcgattgcatcgagaagaaccctttgccatgctgctgcccgccaatcaatta
ttcaacgattatcaaaatcaagacgagattttaattcatgggattattgatgggtattta
gaatttgaagacaaactatttatgtatgatttaaaaaccgattattttacggccggaagg
gaacagcagcttgttaaccgctatcgtggacaaataaatttatataagaatgcattagaa
aaagcaaaacaaaaaccagttgaagcagcttacttaatctttttgcaaggtaacaaggcc
gttgatttgttaaaaactccttag
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