Enterococcus raffinosus: J9537_08575
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Entry
J9537_08575 CDS
T07517
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
eraf
Enterococcus raffinosus
Pathway
eraf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J9537_08575 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eraf03400
]
J9537_08575 (uvrA)
DNA repair and recombination proteins [BR:
eraf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J9537_08575 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J9537_08575 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
nSTAND3
AAA_22
AAA_21
AAA_33
nSTAND_NTPase5
AAA_23
AAA_14
AAA_18
APS_kinase
ATPase
NACHT
SLFN-g3_helicase
AAA_24
Viral_helicase1
NB-ARC
DnaJ_CXXCXGXG
MMR_HSR1
cobW
NTPase_1
DUF87
RNA_helicase
MeaB
PRK
DAP3
Septin
Rad17
Dynamin_N
DUF8091
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
QXJ58098
LinkDB
All DBs
Position
complement(1757856..1760678)
Genome browser
AA seq
940 aa
AA seq
DB search
MANDKIVIHGARAHNLKNVDVTIPRDKMVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGHP
ICPNDHIEITSQSVEQMVDKVLELPERTKIQILAPVVAKKKGQHKKVFEMIQREGYVRMR
VDGELYDVTDAPELTKNKKHDIEIIVDRIVVKEGIRSRLFDSFEAALRLAEGYAIVDVIG
EKEMLFSEHYACPYCGFTVGELEPRLFSFNAPFGACPDCDGLGVKLEVDLDLVIPDQSKT
LREGALIPWNPISSQYYPQMLEQACLSFGIDMDTPFEDLPKEHQEIILNGSNGENFHFHY
ENDFGGVRDVEVPFEGIINNINRRYAETNSDFTRDQMRLYMTELTCQTCHGYRLNPQALS
VKINDVNIGQVSEDSINRALDFFETVALSEQEKVIAKPILKEIKDRLSFLRNVGLDYLTL
SRASGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLKKMRDLGNT
LIVVEHDEDTMRAADYLIDVGPGAGDQGGEIVAAGTPKQVEKNPKSLTGQYLSGKREIAV
PKERRKGNGKKIKVTGAAENNLKSIDAEFPLGKFVAVTGVSGSGKSTLVNQILKKALAQK
LNRNSNKPGKFKKITGYNNIEKLVDIDQSPIGRTPRSNPATYTSVFDDIRDLFAQTNEAK
IRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLEVHYKG
KNIADILEMTVEDAVEFFKHIPKIHRKLQTIVDVGLGYVTMGQPATTLSGGEAQRMKLAS
ELHKNSNGKNFYILDEPTTGLHTDDIARLLKVLERFVDAGNTVLVIEHNLDVIKSADYVI
DLGPEGGDGGGTILATGTPEEIAEVPDSYTGHYLKRVLKK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgataagatagtaattcatggagcgcgagctcacaatttaaagaatgtagat
gtcacgattcctcgtgataagatggtggttgttactggtttatcaggttcaggaaagagt
tcgctggcctttgatacgctatatgctgaaggacagcgtagatacgtggaaagcctatct
gcttatgcgcggcagtttttgggtcaaatggataagcctgatgttgacagcattgatgga
ttgagtccagcgatatctattgatcaaaaaactacaagtaaaaaccctcggtcaacagta
ggaaccgtgacggagattaatgattatttgcgtttgttatacgcacgagtaggtcatcca
atctgtccgaacgaccatattgaaattacctctcaatctgttgagcagatggtcgacaag
gtgcttgaattacctgagcgaaccaaaattcaaatattagcgccagttgttgcaaagaaa
aaaggacaacacaaaaaagttttcgaaatgattcaacgagaaggttatgtccgtatgcgt
gttgatggagaattatatgatgtgacagatgctccagaactaaccaagaataaaaaacac
gatatcgaaatcatcgtcgatcgtattgttgttaaggaaggtatccgctcgcgtctattt
gattccttcgaagcagcgttacgcttagctgaagggtatgcgattgttgatgtgatcggg
gaaaaagaaatgctattcagcgaacactacgcttgtccttattgtggttttacagtaggc
gaacttgaacctcgactgttttcattcaacgcgccgtttggagcttgtccagattgtgac
ggattaggggttaagttggaagtcgatttggatttagttattcctgatcaaagtaaaacg
ttgcgtgaaggggcattgattccttggaatccgatcagttctcaatactatcctcaaatg
ctagagcaagcatgcttgagtttcggtattgatatggatactccgtttgaggatttgcca
aaagaacatcaagaaatcattttgaatggttcaaatggagaaaatttccatttccattat
gaaaatgactttggcggtgttcgtgatgtagaagttccttttgaagggattattaacaat
attaaccgacgttatgcagaaacgaacagtgattttacccgtgatcaaatgcgtttatat
atgacggaattaacatgtcaaacctgccacggttatcggttgaatccacaggctttatca
gtgaaaatcaatgatgttaatattggacaagttagtgaagactctattaatagagcactc
gattttttcgaaaccgttgcattaagcgaacaggaaaaggtaatcgctaagcctattttg
aaagaaatcaaggatcgtcttagcttcttacgaaatgttgggttagattatcttaccttg
agccgagcttcagggaccttgtctggtggagaggctcaaagaattcggttggcgactcaa
atcggttcaaacctatctggtgtcttgtatattttagatgaaccctcgattggtttgcat
cagcgagacaatgaccgcttgattgagtctttgaagaaaatgcgagatttaggaaatact
ttgattgtagtagagcatgatgaagatacaatgcgtgcggcagattatctgattgatgtc
ggtccaggtgcaggggatcaaggtggcgagattgtcgctgctggaacacctaaacaagtt
gaaaaaaatccaaaatccttgactggtcaatatttatctggaaaacgagaaatcgctgtg
ccaaaagaacgtcgaaaaggaaatggaaagaaaataaaagttactggcgctgctgaaaat
aacttgaaaagcattgatgccgagttcccattagggaaatttgttgctgtgacgggtgtc
tcaggatctgggaagtctactttagttaatcagatcttgaaaaaggctctcgcacagaag
ttgaatcgtaattcaaacaaaccaggaaaattcaaaaaaattactggttacaacaatatc
gaaaaattagttgatattgatcaaagtccaatcgggagaacaccgcggagcaatccagca
acctatacaagtgtttttgatgatattcgagatttgtttgctcagacaaatgaagcgaag
attcgcggttacaaaaagggtcggttcagctttaatgtaaagggcggacgttgtgaagct
tgtcgcggagatggaatcatcaaaattgagatgcattttttacctgatgtttatgtgccg
tgtgaagtttgtcacggcaaacgctacaactccgaaacattggaagttcattataaagga
aagaatattgcggatattctggaaatgactgttgaagatgctgtggaattcttcaaacac
attcctaaaattcatcgaaaacttcaaacaattgttgacgttggtttaggctatgtcacg
atggggcagcctgcgacaacactttcaggtggagaggctcaacgaatgaagcttgctagt
gaacttcataagaattccaatggaaagaatttctatattttggatgagccgacaacagga
cttcatacagatgatattgctcgtttgttaaaggttctggaacgttttgttgacgcagga
aatacggtattagtgattgaacataatttggatgtgattaaatcagccgactacgttatc
gatctaggaccagaaggcggcgacggtggtggaaccatactagcaacagggacaccggaa
gagattgctgaagtaccagacagttatacaggacattatttaaaacgcgtcttaaaaaaa
taa
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