Enterococcus raffinosus: J9537_12795
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Entry
J9537_12795 CDS
T07517
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eraf03019
]
J9537_12795
Messenger RNA biogenesis [BR:
eraf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J9537_12795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QXJ58878
LinkDB
All DBs
Position
complement(2636744..2637688)
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AA seq
314 aa
AA seq
DB search
MKKIKELTVDEQFEMYVLIKNADVRLAKNGKKFIAFTFQDTSGTVDGKFWDASEEEIKRY
KAGQVVLLNGKREIYQGNPQVKIMHLRTTKPDEPNDPALYMERAPIKREDMEEEFNKTLF
EITNAHWNRIVRFLLNKYQKEFFEFPAAKRNHHAFAGGLAFHTLTMLRLGKAIAKEYPQL
NTSLLYAGIIIHDLGKVIELTGPSSTEYTVVGNLVGHLVLVDEEITKACAELKINDADED
IVVLRHMVLSHHGLLEYGSPVRPRIMEAEILHQIDNIDASMQMMSSAVKNAEPGTYTERI
FGLDNRSFYVPKDI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaaagaattgacagttgatgaacagtttgagatgtacgtgctaattaag
aacgccgacgttcgcttagcgaaaaatgggaaaaaatttatcgcgtttactttccaagat
acttctggaacggtggatggcaaattttgggatgcttctgaggaagagattaagcgatac
aaggccggacaagtggttttattaaacggcaaacgcgaaatttatcaagggaacccacag
gtgaagatcatgcatctgcgtacaacgaagccagatgaacccaatgatccagctctatac
atggagcgtgcaccgatcaagcgcgaggatatggaggaagagtttaataagacacttttt
gagatcaccaatgcccattggaatcggatcgttcgtttcttgctgaacaaatatcaaaag
gaatttttcgaatttcccgcagcaaagcgcaatcatcatgcatttgccggtggcttggca
ttccatacgttgacgatgctgcgtttaggcaaggcgatcgcgaaggaatatcctcagcta
aatacctcattgctttatgctgggatcatcattcatgatttagggaaggtaatcgagtta
acaggtccttcttcgactgaatatacagtagtaggtaatttagtcggccaccttgttttg
gtagatgaagaaatcacgaaagcctgtgctgaattgaaaatcaatgatgctgacgaagat
atagtggtcttgcgtcatatggtcttgtcacaccatggacttttggaatacggatctcct
gtgcgcccacgcatcatggaagcagaaatcctgcaccaaatcgacaacattgatgcttcg
atgcaaatgatgtcgagtgctgtgaaaaatgcagagccagggacatataccgagcgtatc
tttggattggataatcgcagtttttatgtaccaaaagatatttaa
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