Enterococcus raffinosus: J9537_14960
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Entry
J9537_14960 CDS
T07517
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
eraf
Enterococcus raffinosus
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eraf03032
]
J9537_14960
03036 Chromosome and associated proteins [BR:
eraf03036
]
J9537_14960
03400 DNA repair and recombination proteins [BR:
eraf03400
]
J9537_14960
DNA replication proteins [BR:
eraf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J9537_14960
Chromosome and associated proteins [BR:
eraf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J9537_14960
DNA repair and recombination proteins [BR:
eraf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J9537_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QXJ61296
LinkDB
All DBs
Position
pF162_2_1:43468..43743
Genome browser
AA seq
91 aa
AA seq
DB search
MINKQSLVEQVAEKTGLTKKDATAAVDALFDGIQTSLKDGEKVQVIGFGNFEVRERAARK
GRNPQTGEEITIAASKSPAFKAGKQLKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataaacaaagtttagttgaacaagtagcagagaagacaggattgacaaaaaaa
gacgcaacagcagctgtagatgctttgtttgatgggattcaaacatcattaaaagacggc
gaaaaagttcaagtcattggatttggtaactttgaagtacgcgaacgtgcagctcgtaaa
ggtcgtaaccctcaaacaggtgaagaaatcacgattgcagcaagcaaatcacctgcattt
aaagcgggtaaacaattaaaagacgctgtaaaataa
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