Enterococcus raffinosus: J9537_19310
Help
Entry
J9537_19310 CDS
T07517
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
eraf
Enterococcus raffinosus
Pathway
eraf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eraf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J9537_19310 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eraf02000
]
J9537_19310 (abc-f)
01504 Antimicrobial resistance genes [BR:
eraf01504
]
J9537_19310 (abc-f)
Transporters [BR:
eraf02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
J9537_19310 (abc-f)
Antimicrobial resistance genes [BR:
eraf01504
]
Gene variants
Macrolide resistance genes
Transporters
J9537_19310 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
RsgA_GTPase
ABC_tran_Xtn
AAA_15
ATPase_2
MMR_HSR1
AAA_25
DUF6164
Motif
Other DBs
NCBI-ProteinID:
QXJ61070
LinkDB
All DBs
Position
pF162_2_1:complement(970516..972009)
Genome browser
AA seq
497 aa
AA seq
DB search
MSTIKITHLTFGFDKQVDLLFEDANLTIDSIWKLGLVGRNGRGKTTLLQLLLGNHAYQGE
IQFPLQPVYFPAAVEEPEQLTYYALLELADFELWELEREMNLIQLDPQILWQPYQTLSGG
EQTKVLLALLFTQENFFPLIDEPTNHLDLQGRQHVAEYLQRKDGFIVVSHDRQFLNQVTD
HTLAIEKSQLVLYQGNFATYEEQKELRDEFELAQNKKIKKEVGRLKKTAAEKAEWSRSRE
TDKYGKPSEKGSGGIFDTGFIGARAARTMKRSKTIEQRMYDQIEAKEGLLKDLEDVDRLT
MNYQPSRHGQLLKLENLTLRYADQEPLFAPLSFELKRGEITALTGPNGIGKSSVLHYLLG
TFEGEADGGLLRPSARVSYVRQNYENNSGNLQDFAEKNQLDYSAFLNNLRKLGMERNVFQ
NRIEEMSMGQRKKVELAKSLAQEAELYIWDEPLNYLDVFNQKQLEELLLQIKPTMLIVEH
DQTFLETVQAQQIALKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaattaaaattacacatttgacctttggctttgacaagcaagtagatttatta
tttgaggatgctaatttgacaattgatagcatctggaaattgggcttagttggccggaac
ggtcgcggaaaaacaacattactgcagctattgctagggaatcatgcctatcaaggagaa
attcagtttcccctgcagccggtctattttccagcggctgttgaggagcctgaacagctg
acttattatgccttattggaactggcggattttgaattatgggaattggaacgagaaatg
aacttgattcaattagacccgcagattttatggcagccgtaccaaaccctttctggaggc
gaacaaaccaaggttttattagcactgctctttactcaagagaattttttcccattgatt
gatgaaccaaccaatcatttggatttgcagggtcgccagcatgttgcagagtatttgcaa
cggaaagatggctttatcgtcgtcagccatgatcgtcaatttttaaatcaagtaaccgac
cacactttagcgattgaaaaaagtcagttagtgctctaccaaggaaatttcgccacttac
gaagaacaaaaagaactacgagatgaatttgaattagctcaaaataaaaaaatcaaaaaa
gaagtgggtcgtttgaagaaaacagccgctgaaaaagccgaatggtctcgctctcgtgaa
accgacaaatacggtaagccctccgaaaagggcagcggcggtatttttgatactggcttc
attggtgctcgtgcggcgcgcacaatgaagcgttccaaaacaattgaacagcgaatgtat
gatcaaatcgaagccaaagaaggtcttttaaaagacttggaagatgtcgatcgcttaacg
atgaactatcagcctagccgacatggacaattactaaaattagagaatctaacacttcga
tatgcggaccaggaaccacttttcgctcccttatcttttgaattgaaacgtggagaaatc
actgctttaactggaccgaacgggataggaaaatccagtgtcctccattacctattaggt
acctttgaaggagaggccgacggtgggcttcttcgaccatctgctagagtcagttatgta
cgccaaaactacgaaaacaatagcgggaatttacaagacttcgctgaaaaaaatcagttg
gattattctgcctttttaaataatctgcgaaagctcggcatggaacgaaatgtttttcaa
aaccgcattgaagaaatgagtatgggacaacgaaaaaaagtggaattagcaaaatccctc
gctcaggaagcagagctttatatctgggatgagccgttgaactatctcgatgtcttcaat
caaaagcagctggaagaactcctgttgcaaatcaaacctacgatgctgattgtcgaacac
gatcaaaccttcctagaaacagtccaagctcagcaaattgctttaaaaaaataa
DBGET
integrated database retrieval system
