Erysipelotrichaceae bacterium I46: A4V01_06965
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Entry
A4V01_06965 CDS
T04439
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
erb
Erysipelotrichaceae bacterium I46
Pathway
erb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4V01_06965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erb03400
]
A4V01_06965
Enzymes [BR:
erb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A4V01_06965
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A4V01_06965
DNA repair and recombination proteins [BR:
erb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4V01_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_TFIIB
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_LysW
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
ANU68693
UniProt:
A0A1C7HQE0
LinkDB
All DBs
Position
complement(1436949..1437770)
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AA seq
273 aa
AA seq
DB search
MIELPEARTIAADLRKEVLGKTIQSVSGNFTDHKFTFYYGNPDTYHDRLKNKAVTAVVER
SFYVELEIEDEVLTFRDGANIRWFAKPQQFKKSKLLLMFTDGSCLHVTTSMYAAIHVFPK
TEGAQDAYYEAELKSCSLLDECFTYENFLSKLYHETEKLSVKAFLATKQRFIGIGNGVCQ
DILFYAGLHPKRKMNTLTKDELNTLFFSMKQTLQQMVLEGGRDSEKNIYGEKGGYHCVMS
AGHYKDGCPKCGGRIQKEQYLGGSIYYCPHCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgattgagcttcctgaagcaagaacaatagcagcagatttacgtaaagaggttcttgga
aaaactattcaaagtgtgtccggaaatttcacggatcacaaattcacattttattatggt
aatccggatacctatcacgatcgactgaaaaacaaagccgtaaccgctgtagtagagcgc
agcttctatgtggaactggagattgaggatgaggtgctgacctttcgtgatggagcaaat
atccgctggtttgcaaaaccacagcaattcaagaaaagcaagctgctgcttatgtttaca
gatggaagctgtctgcacgttacgacctccatgtatgcggcaatacatgtttttccaaag
actgagggtgcacaggatgcctattatgaggcagagctgaaaagctgttctttgctggac
gagtgcttcacgtacgaaaattttttaagcaagctgtatcatgaaacagaaaagctgagt
gtgaaagcctttctggcgacaaagcagaggtttataggaatcggaaacggtgtctgtcag
gatatcctgttttatgcgggactgcatccgaaacggaaaatgaatacactgacaaaggat
gaattaaacacattgtttttctcaatgaagcagacgctgcagcagatggtattggaaggc
ggcagagatagtgagaagaacatttatggtgaaaagggcgggtatcactgtgtcatgtcg
gcagggcattataaggatggctgcccgaaatgcggaggcagaattcagaaagagcaatat
ctggggggaagtatttattactgtccacactgccagaaataa
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