Erysipelotrichaceae bacterium I46: A4V01_11915
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Entry
A4V01_11915 CDS
T04439
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
erb
Erysipelotrichaceae bacterium I46
Pathway
erb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V01_11915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erb03019
]
A4V01_11915
03016 Transfer RNA biogenesis [BR:
erb03016
]
A4V01_11915
Enzymes [BR:
erb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4V01_11915
Messenger RNA biogenesis [BR:
erb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4V01_11915
Transfer RNA biogenesis [BR:
erb03016
]
Prokaryotic type
tRNA degradation factors
A4V01_11915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
SPATA25
Pex19
Motif
Other DBs
NCBI-ProteinID:
ANU69585
LinkDB
All DBs
Position
2475928..2478105
Genome browser
AA seq
725 aa
AA seq
DB search
MAKQVFRLDFCGRGLTVETGEVAKQAGGAVLVRYDDTVVLSTATASKQAKEGIDFFPLTV
LFEEKLYSVGKIPGGFLRREGRPSEHATLTARMIDRPIRPLFADGFRNEVQVVNTVLSVD
QDCTPEMTAMFGASLALCVSDIPFNGPIAGVMVGRVDGEYIINPTPEQLEKSDINLTVAG
TKYAVNMVESGAKEVSEEAMLGAIMFGHEHIKQLVAFQEEIAAAVGKEKMEVKLYTVDED
IDREVRAQFEQAIRDAVSIEKKLERYGKIDELTEEAVAVFDAKEYENEAAKAKVLKQVKQ
ICHSIEADEVRRLIIEDKVRPDGRKIDEIRPLDSQVDILPRAHGSALFTRGETQVLSVTT
LGPMNDNQIIDDLTEVETKRFMHHYNFPPYSVGETGRMGSPGRREIGHGALGERALSQVL
PSVEDFPYTIRTVAEVTESNGSSSQASICAGTMSLMAAGVPIKAPVAGIAMGLIMDEENG
KYTVLTDIQGMEDHFGDMDFKVAGTSKGITALQMDIKVTGITREVFEEALAQAKVARAQI
LENMMAAISEPREDVGTYAPKIEQFYIDPEKIREVIGPNGKMINKIIEASDDVKIDIEDD
GHVVIYHMDRAAINHAADMIRDIVREAKVGDIYEGKVVRIEKFGAFVNLFPGTDGLLHIS
KINHERVNKVEDVLNIGDTVRVKVTEIDDRGRVNVSAKALLPRPRTEKKEEDAKPAAAAE
DNKEA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaacaggtatttcgtttagatttctgtgggcgtgggctcacagtggaaactggt
gaagtggcaaaacaggcaggtggagctgtcctggtcagatatgatgacaccgttgtatta
tcaacagctacagccagcaagcaggcgaaggaaggcattgatttctttccgctgaccgtt
ttatttgaagaaaagctgtattcagttggtaagattcccggtggatttttacgcagagag
ggaagaccgagcgagcatgcgacgctgacggcccgtatgattgaccgtccgatccgtccg
ttgtttgcggacggcttccgcaatgaggtacaggttgtgaatacggtattatccgtagat
caggactgtacaccggaaatgaccgcaatgtttggggcatccctggcactgtgcgtttcc
gacatcccgtttaacggtccgattgccggtgtaatggtaggacgcgtggatggcgaatac
atcatcaacccgactccggagcagctggagaagagtgatatcaacctgacggttgccggt
acaaagtatgccgtaaatatggtagagtccggtgcgaaggaagttagcgaggaagcaatg
ctgggtgctatcatgttcggtcatgagcacattaagcagctggttgctttccaggaggaa
atcgcagcagccgttggaaaagaaaagatggaggttaagctgtataccgtggacgaggac
atcgaccgcgaggtacgtgcacagtttgaacaggcaatccgtgatgcggtatccatagaa
aagaagctggaacgctatggcaaaattgacgagctgacagaggaagctgtcgctgttttt
gatgctaaggaatatgaaaacgaagccgcaaaggcaaaggtgctcaagcaggtaaaacag
atctgccacagtattgaggcagacgaggtgcgccgcttgatcattgaagataaagtgcgt
ccggacggtcgtaagattgatgaaatccgtccgctggattcccaggttgacatcctgcca
agagcacacggcagtgcgctgtttacccgtggggaaacacaggtgttaagcgttacgacg
ctgggaccgatgaatgacaatcagatcattgatgatttaacggaagtggaaacaaaacgc
ttcatgcatcactataacttcccgccgtattccgtaggggaaacaggacgtatgggaagc
cccggccgtcgtgagatcggtcatggtgcactgggtgagcgtgcactgtcccaggtactg
ccgagtgttgaggatttcccttacacaatccgtacggttgccgaggtaaccgaatccaac
ggttcctcctctcaggcatccatctgtgccggaaccatgtctttgatggcagccggtgtt
ccaatcaaggcgccggtggctggtattgccatgggtctgatcatggatgaggaaaatgga
aagtataccgtactgacggatattcagggtatggaggatcacttcggtgatatggacttt
aaggttgccggtacaagcaagggtatcacagcactgcagatggatatcaaggtgactgga
atcaccagagaagtatttgaagaagctctggcgcaggcgaaggttgcccgtgcgcagatt
ctggaaaatatgatggcagccatcagcgaaccgagagaagatgttggaacctatgctccg
aagatcgagcagttctatatcgatccggaaaagattcgggaggttatcgggccaaacggc
aagatgatcaacaagatcattgaggcgagcgatgatgttaaaatcgatattgaggacgac
ggacatgtggtcatttaccatatggatcgtgcggcaatcaatcatgcagcggatatgatc
cgtgacatcgtacgggaagccaaggtcggcgatatttacgagggcaaggttgtccgtatt
gaaaaattcggtgcctttgttaatctgttcccggggacggatggactgctgcacatttcc
aaaatcaatcatgagcgtgtcaacaaggtggaggatgtattaaacatcggggataccgtt
cgtgtcaaggttacggaaatcgatgaccgcggccgtgtgaatgtcagcgccaaggcactg
cttcctagaccaagaacggaaaagaaggaagaggatgcgaagcctgcagctgctgcggag
gataacaaagaagcataa
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