Erysipelotrichaceae bacterium I46: A4V01_12545
Help
Entry
A4V01_12545 CDS
T04439
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
erb
Erysipelotrichaceae bacterium I46
Brite
KEGG Orthology (KO) [BR:
erb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erb03019
]
A4V01_12545
03009 Ribosome biogenesis [BR:
erb03009
]
A4V01_12545
Enzymes [BR:
erb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4V01_12545
Messenger RNA biogenesis [BR:
erb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V01_12545
Ribosome biogenesis [BR:
erb03009
]
Prokaryotic type
rRNA helicases
A4V01_12545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
YgaB
Motif
Other DBs
NCBI-ProteinID:
ANU69706
UniProt:
A0A1C7HQP8
LinkDB
All DBs
Position
complement(2597350..2598714)
Genome browser
AA seq
454 aa
AA seq
DB search
MSKYTDYNFRETTKTFINLEGFKEPTPIQQAVIPLACKGRNIIGISDTGTGKTHSFLIPI
MERVDSSLSVIQAVITAPTRELALQIYNRCEKMSEADPKLRIRLITGGMEKSRMNEQLKV
QPHIVVGTPGRIKDLFLQEQTLRVDTADIMVVDEADMTLEFGFLEDVDAIAGKMKKNLQM
MSFSATIPVALQQFLKKYMDNPSTVHIQEQSDFHPKIEHVLIPCQEKSYEEKLMELLATF
TPYVCLIFANTRTQAASVAGMMRDAGYGIIELHGDLTPRERTKAMKDLVNIQKSYVVATD
IAARGIDIEGISHVISLGFPKELDYYIHRSGRTGRAGRDGICYALYKKQDDAIIRSLEVK
GVGFKHRNLKNGTWSELEPLHRKKVKKDDPLEKEISKIVSKKKKKVKPGYKVKRKQEVEK
LKRKARRQMIQEDIQRQKKERAKQRVMEKRGGQE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatatacggattacaactttcgtgagaccacgaaaacatttataaacctggaa
ggcttcaaagagcctacaccgattcagcaggcggtgatcccgctggcatgcaagggaaga
aacatcattggtatttccgatacgggtaccggaaaaacacattcctttctgattccgatt
atggagagggtggacagcagtctgtctgtgattcaggcagttattacggcaccgaccaga
gagcttgccttacagatttataatcgctgtgaaaaaatgagtgaagcagacccgaagctt
cgcatccgtctgattaccggcggtatggaaaaatccagaatgaacgaacagctgaaggta
cagccgcatatcgtcgtaggaacaccgggacgtatcaaggacctgtttttacaggaacag
accctgcgtgtggataccgctgatatcatggttgtcgatgaagcggatatgacactggag
tttggctttctggaggatgtggatgccattgccggaaaaatgaaaaagaatttacagatg
atgagcttttcagcaacgataccggttgcattgcagcagtttttaaagaaatatatggat
aatccaagtacggtgcatattcaggagcagagtgattttcatccgaaaatcgagcatgtg
ctgataccgtgtcaggaaaagagctatgaagaaaagctgatggagctgttagcgaccttt
acaccctatgtatgtctgattttcgctaacacgagaacgcaggccgcaagtgttgccggg
atgatgcgggatgccggatacggtattatcgagctgcacggggatttgacaccgcgagag
cgaacaaaggcgatgaaggatttggtaaatatacagaaatcctatgtggtagcgacggat
atcgctgcgcgcggtattgatattgaagggatttctcatgtgatttcattgggatttcca
aaggagctggattactatattcatcgaagcggacgtaccggacgtgccggtcgggacggt
atctgctatgccctgtataaaaagcaggatgatgccataatccgctccctggaggttaag
ggagtcggcttcaagcatcgcaatctgaaaaacggcacctggagtgagctggagccgctg
catcgcaaaaaggtcaaaaaggatgatccgctggaaaaggaaatttccaaaatcgtttcc
aaaaagaagaaaaaggtgaagccgggctataaggtgaaacggaagcaggaagtggaaaag
ctgaagcgtaaggcacgccgccaaatgattcaggaggatattcagcggcagaaaaaggaa
cgtgcaaagcaaagggtcatggagaaacggggtggacaggaatga
DBGET
integrated database retrieval system
