Eremothecium cymbalariae: Ecym_1108
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Entry
Ecym_1108 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03440
Homologous recombination
erc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ecym_1108
03450 Non-homologous end-joining
Ecym_1108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erc03032
]
Ecym_1108
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_1108
DNA replication proteins [BR:
erc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
Ecym_1108
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
Ecym_1108
BRCA1-C complex
Ecym_1108
NHEJ (non-homologous end-joining)
MRX complex
Ecym_1108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_21
SbcC_Walker_B
AAA_13
DUF1664
AAA_29
ABC_tran
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
11469574
NCBI-ProteinID:
XP_003644180
UniProt:
G8JMK8
LinkDB
All DBs
Position
1:226176..230072
Genome browser
AA seq
1298 aa
AA seq
DB search
MSAIHNLSIQGIRSFDARDKEVIKFGKPLTLIVGANGCGKTTIIECLKYATTGDLPPNSK
NGAFIHDPKINGEVDVRAQVKLAFTNANGVQMVVTRNIQLMKKRSTATFKTLEGQLVSIN
KGERTTLSTRAADLDQQVPLYLGVPKAILDYVIFCHQEDSLWPLSEPANLKKRFDEIFQA
MKFTKALDNLKSIKKDMAVDIRLLKQSVEHLKTDRDRSRAIALSISELEDKTESYKATLP
VLEAQLKDITEQSDKLFKSNQEFQQVLSKLDNLKHSRESVANQIKRLEESIEPLDMSRDE
LQQLLDNFSSAVDEKRDVVSKLEDDLSNVDEKLQRLRGIRESMISEHAVLSSNKEKYVNN
LKLHEELSAKLVAKYKFSGVDILHDMKLLVLDTEKAVSKAREDNRLREEGCQDLLAKKRN
TLVKEEQKLSYTESDATKLKEQLDALNVRLTSIEQTESDLKVSKEDLEKYKSLVDTWRQD
KNFEQFNKDIKAKNDEMLILEHEVENVQNQISKTNQHSDLLAKYSMLKSSIQDKKKELDS
SILKIEGDKSSQLLGMEVTDDFELDLKKNYINLQKQIASSSRSNREASAKCTEFQIELRS
AEKELNQLNKKVLDLREKLANELPEDCSIDEYDEVLLESEESYRVSLENLKMHRTTLEFN
LKALEIAENDHCCYLCQRKFQNDVEKANLLEELHSKTKSDFEQTLIKEVQDQKEYYFSLR
KLEKDIIALREVESKVKLAQENVSQWKVVHHNSKLNMELADSEHNRLKEAQDHFERTLKP
IVNDVIRLRKELNQSEADCSRIEEELSIYSEHSNGVQTIDEFQLKQKNINGRLRLLRKEI
GKLQEEKENSSTEYNNLLNLVREKTFKVNYIEKKLEEKRHIQKDIDDIASKYGNVDSVVL
EIQKIIDGLNSEIGVLEKSLEEVRIENRKLEQQQDLNLTELKSNFGVFNSIVEEIKAFEI
DGIKKLEDVESSLQDCNEEIDTLSHKVNELNQKIISESQKLKDSTSEQKNMKLNIDLIDL
KGRLAQIGEHILNLDSQNAEAERDRYQQESTRLRFMFEKLSSENAGKLGEIKQLQNQISS
LTKQLQTEYKDVDINYQNEWARLQTKTLVADDIDTYSKVLDSAIMKYHRLKMEDINRIID
ELWKRTYSGTDVDTIKIKSDELSNNNKGKSYNYRVVMYKQDAELDMRGRCSAGQKVLASI
IIRLALSETFGINCGVIALDEPTTNLDEDNIASLARSLSNILEVRRHQKNFQLIVITHDE
KFLSHMNAVNFTDHFWKVKRDDRQKSEILMVDIATAKE
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatccataacctatccatacagggtatcaggtcatttgatgcacgtgataag
gaagtaatcaaatttggcaagccgttgactttgattgttggggctaatggatgcggtaag
acgactattatcgagtgtctgaaatacgctactacaggggacttgccacctaattcgaag
aatggggcgtttattcatgatccaaagattaatggtgaggtagatgtgagggcgcaggtt
aagttggcgtttacgaatgcaaatggagtgcagatggttgtaacgaggaacatacagttg
atgaagaagcggtcgacggcgacattcaagactttggagggccagttagtttctattaat
aagggggaacgtacgactttgagcacgcgggctgcggatctggatcagcaggttcctttg
tatcttggggttcccaaggctattttggattatgttatcttttgtcaccaggaggattcg
ttgtggccgttaagcgagcctgctaatttgaagaagaggtttgatgagatattccaggct
atgaagtttaccaaggctttggataacctgaaatctatcaaaaaggatatggcggtggat
atccggctgctaaagcagtctgtcgaacatttgaagaccgatcgtgataggtcccgagcc
atagcactatccatttccgaattggaagacaagacggagagctataaagcgacccttcct
gtgcttgaagctcagttaaaggatattaccgagcagtctgataagctgtttaagtcaaat
caggagtttcagcaggtgttgtctaagttagataacctaaagcattcccgggaatctgtt
gctaaccaaataaaacggctagaggaatcaatcgagcctttagacatgagcagggatgag
ttgcagcagctgttggacaatttttcatctgctgtagatgaaaaacgtgatgtcgtttcc
aaattagaggacgatctttctaatgttgatgagaagcttcagaggctaaggggcatccgg
gagtcaatgatatctgagcatgcagtactgagttctaataaggaaaagtatgtgaataat
ctgaagttgcacgaagaactgtcagccaagttagttgctaagtacaagttttctggtgtt
gatattttgcacgatatgaaattgctggttcttgatactgaaaaagctgttagcaaagca
cgagaagacaacagattacgtgaagagggctgccaagatttgttggccaagaagaggaat
acattggtcaaggaagagcagaaactttcctacactgaaagtgatgcgactaaactgaaa
gaacagttggatgccttaaatgttaggttaacatcaattgaacagactgagagcgattta
aaggtttctaaagaagatttggaaaagtataagtctcttgttgacacttggaggcaggat
aaaaattttgagcaattcaataaggatataaaagctaagaacgatgagatgttaatcctt
gaacatgaagttgaaaatgtccagaatcagatttcgaaaacaaaccagcattcagattta
cttgccaagtattctatgttaaagagctccattcaagacaagaagaaggaattggatagt
agtattttaaaaattgaaggcgacaagagcagtcaattattgggaatggaggttacagac
gattttgaactagatttgaaaaagaattacataaacctacagaagcaaattgcaagtagc
agcagaagcaatagagaagcgagtgccaagtgtactgaatttcagattgaattgagatca
gcagagaaagaattaaatcaattgaataaaaaagttctcgacctgagggagaaacttgcg
aacgaattgcctgaggattgtagcattgacgaatatgatgaggtgctactagaaagtgaa
gagtcatatagagtttcccttgaaaatttaaaaatgcataggacaacccttgagtttaac
ttaaaagctctcgaaattgcggagaatgatcactgctgttatctatgccaaaggaaattt
caaaatgatgttgagaaagctaatttattggaagagttacattctaaaaccaaatctgat
tttgagcagaccttaataaaagaggtacaggatcagaaggaatattatttttccttgaga
aaattagagaaggatattattgctttaagggaagttgaatccaaagtaaaattggctcaa
gaaaatgttagccagtggaaagttgtccaccataactccaagttaaacatggagttagct
gatagtgaacataatcgtttaaaagaagcacaagatcattttgaaagaaccttaaaaccg
attgttaacgatgtcatccggctccgaaaagagttaaatcaatctgaggctgattgtagt
cgaattgaggaggaattgagtatatattccgaacattctaatggggttcaaacaatagat
gaattccaacttaaacagaaaaacattaatggacgtttgagattgttacgtaaggagatt
gggaagttgcaggaagaaaaagaaaacagttccacagaatataacaatttgttaaatctt
gttagggagaaaacatttaaagttaattatatcgaaaaaaaactcgaagaaaagcggcat
attcagaaggatattgatgatatagcttcaaaatatggtaatgtggatagcgtggtacta
gaaattcaaaaaattattgatggtttaaattctgaaattggtgtacttgagaaatcacta
gaagaagtacgtattgagaatcgaaagttagagcagcaacaagatttaaatttaacggaa
ttgaaatcaaattttggagtgtttaattctatcgtcgaggagataaaagcttttgagata
gatggaataaaaaaattagaggatgttgagtcttctttgcaggactgcaacgaagaaatt
gatactttgtcacataaagtcaatgaattgaaccaaaagataatctcagaatcccagaag
ctgaaagactccacttctgaacagaaaaatatgaagttaaacattgatttaattgatttg
aagggtcggttagctcagattggggaacatattttaaacctagattcacagaacgccgaa
gctgagcgtgaccgttatcaacaagaatcgacaaggttgagatttatgtttgagaagtta
agctctgaaaatgcggggaaattgggggagatcaaacaactgcaaaatcaaattagttcg
ttgactaaacaattacagacagaatataaagatgttgatataaattaccagaatgagtgg
gcaaggcttcagacaaagacgttagttgctgatgatattgatacttattctaaagtccta
gatagtgctattatgaaatatcatcgtcttaagatggaggatattaatcgtattattgat
gagttatggaagcggacctacagtggtactgatgtggatacgattaaaatcaagtccgat
gagcttagtaacaataataaggggaaatcttacaattatcgtgttgttatgtataaacag
gatgcggaattagacatgagaggcaggtgctcagcggggcagaaagtgctggcttccatt
attattaggcttgcattatcagaaacgtttggtataaattgtggcgttatagcgttggat
gagcctacgactaatttggatgaggataatattgctagtttggctaggtctttaagtaat
atccttgaagttcgcaggcatcaaaaaaatttccagttgattgttattacacatgatgag
aagtttttaagtcatatgaatgctgtaaacttcacagatcatttctggaaggttaaaaga
gatgataggcaaaaatcagagattctgatggtcgacattgccacggcaaaagaataa
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integrated database retrieval system
