Eremothecium cymbalariae: Ecym_1202
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Entry
Ecym_1202 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_1202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_1202
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
Ecym_1202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
11469620
NCBI-ProteinID:
XP_003644267
UniProt:
G8JMY6
LinkDB
All DBs
Position
1:complement(join(408312..409565,409631..409633))
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AA seq
418 aa
AA seq
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MSKLFIPTVNCGKAHDADIFGLSVITPFTATCSGDGTIKLWKNKLLDGEVPKDNVVTQFV
NKTGVHHIDVFYSTERTGVVVCIIACAAFDGSLSFYSVDLLTWTLKRLDLLTTEEKKRSF
WCVKWHKSSDHSLTHKFVATEVNGNTRVWRFHPFKQELEEVKVTTLKKGKDSNAIPQESA
QPDEEKKLEWYPHFTVHGDIYPPNAKFATCVDVSSHNLIATGFSDGSVVISQLSTMRPIY
NFEGFGLQGTRENSSTVRSLKFSPLGGLLAVANDSGSYGCVTLYETEYGELVGNLSVPSH
SNQQSIVPVAHSGWLFDMSFNSTGEFLATCGYDAKIRIWDVKLREHVSTLHVSSGDIEDE
KEMLLKDEHGTSLANPAVLGVSFVGKGVRGGMGSDKNEGLCSICLDRSVRWYREAGGV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagctattcattccaactgtaaactgtggcaaggcacatgatgcagatatattt
ggtctatctgttataacaccatttacagctacatgttctggtgatgggactataaagctg
tggaaaaacaagttgctagacggtgaggtacctaaagataatgtggttactcaatttgtt
aacaagacgggtgttcatcatatagacgtgttttattctactgaaagaactggggttgtg
gtttgtattattgcctgtgcagcgtttgatggatctttatcattttattctgttgattta
ttgacgtggactttaaaaaggttggatttgcttacaactgaggaaaagaagaggagtttt
tggtgcgttaagtggcataaaagtagcgatcattctttgacccataaatttgttgctaca
gaggttaacggtaatacaagggtatggagattccatccatttaaacaggaattggaagag
gttaaagtgactacattgaagaagggtaaagatagtaatgcaatacctcaggaatcagct
caaccagatgaggaaaagaaactagaatggtatcctcattttactgttcacggcgatatt
tatccgcccaacgctaaatttgcaacttgtgtagatgtgtcttcgcacaatttaatagcg
actggattttctgatggtagtgttgtaatatctcagttgtctacaatgagaccaatctac
aatttcgaagggtttggattacaaggtacaagggaaaatagcagcacggttcggtcacta
aaattcagtcctttgggtgggctgctcgctgttgcaaacgattcaggttcatatggctgt
gttacattatatgaaacagaatatggcgagttagtgggtaatttatcagtaccctctcat
agcaaccagcagtctattgtacctgtcgcacatagtggatggttgtttgacatgagcttt
aattctactggagagtttcttgctacctgtgggtacgatgctaagatccgtatatgggat
gtaaaactacgggagcatgtctccactttacatgtatcgtctggggacatagaagatgag
aaagaaatgcttttaaaagacgaacacggtacttctctggcgaatcctgcagtcttgggc
gtcagttttgttggcaagggtgttcgtggtggtatgggaagtgacaagaatgaaggatta
tgttctatttgcttggatagaagtgtgagatggtaccgagaagctggaggtgtgtag
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