Eremothecium cymbalariae: Ecym_1249
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Entry
Ecym_1249 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_1249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_1249
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Ecym_1249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_9
TetR_C_24
Motif
Other DBs
NCBI-GeneID:
11469644
NCBI-ProteinID:
XP_003644309
UniProt:
G8JN28
LinkDB
All DBs
Position
1:508944..509606
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AA seq
220 aa
AA seq
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MSISVLEHVDGSSQYWTPTTSLICSVSGPIEPKARQEIPQHLAIEIIFRPASGPSTTREK
LLEERIRAAVTPMVETFLHPRQLCQITFQALKSVGQYSHMELNSAINAAFLALIDAGIPL
KSVFTSVTVSVDEDGRKFVNPDVNRLQTAKSVSTVAFKISTGNNTLLLLHSDGSFDESTL
FGVLELAEQECVRLSKEFRKLIAEKLGKDFIWKQPANLKN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcggttttggagcatgttgatggatcttctcagtattggacacctaccacg
tcgctcatatgctctgtttctgggcctattgaacccaaggcaagacaagaaattccgcag
catttggcaatagagatcatctttagaccagcctctgggccttctactactcgggaaaag
cttttggaggagaggataagagctgcggtgacaccaatggtggagacatttttgcatcct
agacagttatgccaaataacttttcaggcattaaaatctgtagggcagtatagtcatatg
gagttaaatagtgctataaatgcagcatttttagcactcatagatgcaggtataccgtta
aaatcagtgtttacatcggtgacggttagtgtggatgaagacggcagaaaatttgtgaat
ccagatgttaaccggttgcaaactgccaaaagtgtttctactgtagcattcaagatttcc
accggtaataatactttactgcttttgcatagcgatggttcatttgacgaaagtacttta
tttggagttttagagttagcagagcaggaatgtgttagattatctaaagagttcagaaaa
cttatagctgagaaactgggaaaggatttcatttggaagcaacctgcgaacttgaagaat
tag
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