Eremothecium cymbalariae: Ecym_1336
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Entry
Ecym_1336 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_1336
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Ecym_1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
11469689
NCBI-ProteinID:
XP_003644387
UniProt:
G8JNA6
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All DBs
Position
1:696201..697430
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AA seq
409 aa
AA seq
DB search
MSSVEELISDGEEECGTEQTSQVYLGFVDTAIRESDEVSVEESFIGGEPVWLHADSRPDE
KLLSCKACKSVENMKLLLQAFAPLDSQQVYEVCERSGIVLSTEEFIRDSDDRVLYVFICS
KCARKAGSIVCIRGVRRRSSDPSRGAPKQVAADAGRSDTVDEEKEVENNNNPFASVGFGT
FGNPFNQDAEKNPFMKKDSSGDAKVVVSEQEMKPSTARKLHDAQPYKKFDKEVAFPGFFL
YVEGESFKGRVPDHLKLPKNLKIDKNALELSADEDELKNGPIKLDPRTEKLSKFLDDDVF
QKFQEVVGYNPLQVLRYNYGGKPLYYARTAKKFEDVVAAPSANPSSRRIYEMQLMPKMIM
DLEDEISIESGMEWGTIMIFTDVENYVTEFDKNNVGYMEESVVVQWETS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgttgaagaattaatctcggatggtgaggaggaatgtggcacagagcagaca
agccaagtgtatcttggatttgtggatactgcaataagagaatccgatgaggtttctgtg
gaggagtcatttataggtggagaacctgtttggttacatgctgattctcggccagatgag
aaacttttaagttgtaaagcatgcaagtctgttgaaaatatgaagttattattacaggcg
tttgccccgttggattctcaacaagtttacgaagtgtgcgagaggagtgggatcgtgttg
agcaccgaggaattcattcgtgattccgatgatcgtgtgttatatgtgtttatttgtagt
aaatgtgcgcggaaagctggttcgattgtgtgcattaggggtgtgagaagaaggagtagc
gacccatcccgtggggctccaaagcaagttgcggctgacgctggtaggtcagatacggtg
gatgaagaaaaagaggttgaaaacaacaataatccgtttgcctcggttgggtttgggaca
tttggaaatccttttaaccaagatgctgagaaaaatccattcatgaagaaggattcgagt
ggtgatgcgaaagttgtggtgtcagagcaagaaatgaagcccagtactgcaagaaaactt
catgatgcacagccatataagaaatttgataaagaggtggcatttcctgggtttttcctc
tatgtcgagggcgaatcctttaaaggtcgggttccggatcacttgaagttacccaaaaat
ttgaagatcgataaaaatgccctggaactgtcagctgatgaagacgagttgaaaaacggt
cccattaagctggaccccaggacagagaagttatccaaatttttagacgatgatgtgttt
caaaagttccaagaggttgtagggtataatcctctgcaagtattacgctataactatggc
ggcaagcctttatactatgctcggactgcaaaaaagtttgaagatgtagtagctgcacca
agtgctaacccatcttcacgcagaatatatgagatgcagttgatgcccaagatgataatg
gacttggaagacgagatatcaatagaaagcgggatggaatgggggacgattatgatcttc
actgatgttgagaattatgtcactgagtttgataaaaacaacgttgggtacatggaagaa
tcagttgtagtacaatgggaaacaagttaa
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