Eremothecium cymbalariae: Ecym_1354
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Entry
Ecym_1354 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_1354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_1354
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Ecym_1354
mRNA degradation factors
5'-3' decay
Decapping complex
Ecym_1354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YjeF_N
FDF
Motif
Other DBs
NCBI-GeneID:
11471403
NCBI-ProteinID:
XP_003644404
UniProt:
G8JNC3
LinkDB
All DBs
Position
1:complement(728128..729858)
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AA seq
576 aa
AA seq
DB search
MSQFQGFKVQVELKDGKLITGSISKCNSKSLTLQEVVFSDGGISQLFKVKSTRLKNLKVI
GVPKGGKKWISSSNTGNSSNGSHNNNNNNNGRIENASRVQNNGAIHGSNGSTSNTCGTTD
ISDNNGSVSRSAKVSSSNNSVKKDGNWEHDDDLEKLKSEEFDFQGNLRMFNKEDVFAKLK
QQDTVNPNERLVSHNKQKKTKLNFENDEMVITNAKDDDWEERPGVSATKNRTTTPSVTAD
AGSSGPSTEYLPITKSINITHLLQQSNKSSASEEEVLSKLQKVLSPSSRSPSLSKTPGFR
TLKTNISVPLANPVQLLEMERLASDTFAFPPALSIEHSAVHLSKFIKQKLGGRARLYNAN
NNAQPLMVILASDNRSGARALAVGRCLSQHGHIRVIAVLTTEMMAHGPVSDNSVRSQLEM
FTKFGGKIVDTVSGLKSMLEKLNSPVEIVLDAMQGFDCNLSDLVDTYESDDESSELARIK
NLITWCNEQTCAVWSLDIPSGIDAGSAIPNFDTYIRPTTIISTAWPLTSLNLLDCHELYL
CDIGIPQQCYAMRNSLRKFSAVEDIFVTEGVVQLTR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaattccaagggtttaaagttcaagttgaattgaaagatggtaagttgatcaca
ggatctatttcaaaatgcaattcaaaatcgttaactttacaagaggttgtgttttcagat
ggaggaatatcgcagttgtttaaggttaagtctacgcggttaaagaatctgaaggtgatt
ggagtcccgaagggaggcaagaagtggatatctagcagcaataccgggaatagcagcaac
ggcagccacaacaacaacaacaacaacaacggcagaattgaaaatgccagtagagttcag
aataatggagcgatacacggaagtaacggcagtaccagcaatacctgtggtacgactgat
atttctgataataatggtagtgtaagcagaagtgccaaagtaagcagcagcaacaatagt
gtcaagaaagatggtaattgggaacatgatgatgaccttgaaaagctgaagagtgaggag
tttgatttccagggtaacctgaggatgttcaataaagaagatgtgtttgcgaaattgaag
caacaggacactgtcaaccctaacgaacggctggtgtctcataacaagcagaagaagact
aagctgaactttgaaaatgatgaaatggtgatcaccaacgccaaagatgacgattgggaa
gaaagacctggcgtttctgctactaagaataggacaaccacacctagtgttactgccgat
gccgggagcagtggtcctagtacagaatatctaccaataaccaagtctattaatattacc
catttgttgcagcagagcaacaaaagcagtgcgtctgaagaagaagtactttcaaaacta
caaaaagtgctatcgccttcatccagatcaccttcactaagcaagacaccgggcttccgt
acactgaagacaaatatatctgtgccattggctaaccctgtgcagctgcttgagatggag
aggcttgcgtcggacacttttgccttccctccagcgttatccatagaacacagtgccgtc
catctctccaagttcattaagcagaagttagggggcagggcccgtctgtataatgccaac
aataatgcccaaccactaatggtaatactagcaagtgacaaccgctccggcgcccgcgcc
cttgctgtcggtcgctgtctctcccagcatggccatatcagagttatagcggtgctcacc
acagaaatgatggcccatggtcccgtctccgacaattcagtacgttcccaactcgaaatg
ttcaccaaattcggtgggaaaatcgtggataccgtgtcaggcctaaagtctatgttggaa
aaactcaactcccccgtggaaattgtccttgacgcaatgcagggcttcgactgcaacctc
tcagatctggtcgacacctacgaatcagacgatgagtcctccgaattggcccgcatcaaa
aaccttatcacctggtgcaacgagcagacctgcgcggtctggtccctcgacatccccagt
ggcattgacgcaggctcagccatcccaaacttcgacacctacatccgcccaaccaccatc
atcagcaccgcctggccattgacctccctcaacctactggactgtcacgaactctattta
tgtgacatcggcatcccgcagcagtgctatgcgatgagaaattccctgcgcaaattctcc
gcagtagaagacatcttcgtcacagaaggcgtggtccagctcaccagatag
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