Eremothecium cymbalariae: Ecym_1369
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Entry
Ecym_1369 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
erc
Eremothecium cymbalariae
Pathway
erc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ecym_1369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_1369
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_1369
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
Ecym_1369
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
Ecym_1369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
UvsW-1
Motif
Other DBs
NCBI-GeneID:
11470450
NCBI-ProteinID:
XP_003644419
UniProt:
G8JND8
LinkDB
All DBs
Position
1:759360..762473
Genome browser
AA seq
1037 aa
AA seq
DB search
MDGADELELWGLQGIDQSTLEQKLESTAQNLINKKSEEQERARLERYEEKLKLLQQQKVA
LKQNIRNATRISVRDKLSQKLSNLQEDDLAPLLKDIEDIKLRLRSIKNGKRYSKSQNLDP
SAKQTNETEDEFLLRTGKITAFGNRTKFMLDVDDGRANNDAEQVIGKLEHDESIKNTDSN
LLDDSEDEFRLSGGESQDKDSDIFSNTSRDIFDDGVESYYNKRLNKWIAKRSHGRPNNSY
PNIPEWERPHPTLSGAKLNNDFKIPGDIFPLLFDYQKTCVQWLYELYQQKSGGIIGDEMG
LGKTIQIISFLASLHHSGKLNRPVLVICPATVLKQWCTEFHKWWPPFRTIILHSIGTGMV
NKKKLTEQEIEEIIMKSKAEEFSYDDYSNFERTKKEIESNYNIKSLIDKVLNLGHVLITT
YVGLKIHADELLKVDWGYVVLDEGHKIRNPNSEISLTCKRLKTHHRIILSGTPIQNNLTE
LWSLFDFIFPGKLGTLPVFQQQFAVPINSAGYANATNIQVQTGFKCAVALRDLISPYLLR
RLKVDLARDLPKKTEMVLFCKMTQVQKDKYLQFLNSDDLVKIKNGKKQVLFGIDILRKIC
NHPDLLEREFKKHNISYGDPKRSGKMQVVKRLLQIWHEQGHKALLFTQSRQMLDILESFI
SSKDPDLSHLTYLRMDGMTDIGHRHALISKFNKEPYDVFLLTTRVGGLGVNLTGANRIII
FDPDWNPSTDIQARERAWRIGQKREVSIYRLMVAGSIEEKIYHRQIFKQFLTNKILSDPN
QKRFFKMNELHDLFTLGNDCSSGNEAFMQEVSKQTEKLKKDSSEGADDFNQVINIEGVSK
LEGFYNAKEKEVENMNEDDRLMNSFFGGGDLTNSLGHSSMLDMHTTPTNDIIAKEAALVA
QNAVNVLNKSRKLTKRYEIGIPTWTGKFGQAGIIKKKRHPQIQRSSKILENLTKPKDDIF
NENKFPLDSNAELLERIRKYLQGQPLYFSKSADVVKQLQLKLKNEEDLINVRALLRGIAT
FDKGMSGWVLKDEFRGP
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggatggggctgatgaattagagctttggggactccaaggcatagatcagagcacttta
gaacagaaacttgagtcaactgcacaaaatttaattaataagaaaagcgaagagcaggaa
cgagctagacttgaacgatatgaggagaagttgaagttgcttcaacaacaaaaggtggca
ttaaaacaaaatattagaaatgctacaagaattagtgtacgagataagctaagtcaaaag
ttatcaaacttgcaagaggatgacttggccccacttctaaaagatattgaggacattaag
ttgcggctacggtcaataaagaatgggaaaaggtatagtaaatcacaaaaccttgatcca
tcagctaagcaaactaatgaaacagaagatgagttccttttaagaacaggaaaaataaca
gctttcggaaatcgcacgaagtttatgttggatgttgacgacgggagagctaataatgat
gcagaacaagtaattggaaagcttgaacatgatgaaagtattaaaaatacagattctaat
ttattagatgattcggaggacgaatttcgattatctggaggtgaatcccaggataaggat
tccgatatattctcaaacacctctagagatatatttgatgatggtgtcgagtcttattac
aataaacgtctaaataaatggattgctaaaagaagccatggtcgtccaaataattcatac
ccaaatatccctgaatgggaacgccctcatcctacgctctcaggtgcaaaactgaataat
gattttaaaattcctggtgacattttcccattactatttgactatcagaaaacgtgcgtt
caatggctttacgaattatatcaacaaaaaagtggcggtattattggtgatgagatgggt
ttaggtaaaactattcaaataatatcgtttcttgcttctttacatcactcggggaagctt
aatagacccgttcttgtcatatgtcctgctactgttttgaaacagtggtgtactgaattc
cataaatggtggcccccatttcgcactattattttacattctattggaactgggatggtt
aataagaagaaattaacagagcaagaaattgaggaaattataatgaaatcgaaagcagaa
gagttctcgtacgatgattattcgaattttgaacgcactaaaaaagagattgaatcaaat
tataatattaaaagtttaatagataaggtattgaacttaggacatgtactaataaccact
tatgttggactaaaaatacatgctgatgaattgcttaaggttgactggggctatgtggtt
cttgatgaaggacataagattcgaaacccaaattcagagatttctttaacttgtaagagg
ttgaaaacccatcataggataatcctttcaggtaccccaattcagaataatttaaccgaa
ttgtggagcctttttgactttattttcccgggaaaactaggtaccttgccagtgtttcaa
caacagtttgcagtcccaataaactcagctggttatgcaaatgctaccaatattcaagtt
caaaccggcttcaagtgtgctgtagcgttacgtgacctgatatctccgtatcttttacga
agactgaaggttgatttagcaagagatttacctaaaaagactgagatggtcctattctgt
aaaatgactcaagttcagaaggataaatatttgcagttcttaaattcagatgacctagtg
aagattaaaaatgggaagaaacaggttctatttggaatcgacattctaagaaaaatatgt
aaccatcccgatcttctggaaagggagttcaaaaaacacaatatttcatatggtgatccg
aagaggtctggcaaaatgcaagttgtcaaacgcttattacaaatctggcacgaacagggg
cataaggcccttctttttactcaatcaaggcaaatgttggatatattagagagttttatc
tcttctaaagatccggatctctcacatctaacttatttaagaatggatggtatgactgat
attggccacagacatgctttaataagtaaattcaataaggaaccctacgatgtatttctg
ctcactactagagttggtggtcttggtgtgaatttgactggtgcaaataggataattatc
ttcgaccctgactggaacccatcgacagatatccaagctagggaaagagcatggagaatt
ggccaaaaaagagaagtttcaatatatcgcttaatggtcgctggctccatagaggaaaaa
atataccaccgacaaatatttaaacaatttctgacaaataaaattttgagtgatcctaac
caaaaacggttctttaagatgaatgagttacatgacttatttactcttgggaatgattgt
agcagtggaaatgaagctttcatgcaagaggtctctaaacaaacggaaaaactgaaaaaa
gattcatctgagggggctgatgatttcaatcaagttataaatattgaaggtgtatccaag
cttgaaggcttttataatgcgaaggagaaagaggtcgaaaatatgaatgaagatgataga
ctcatgaatagcttctttggtgggggggatcttacaaattccctggggcatagttcgatg
ttagatatgcatactacaccgacaaatgatattattgctaaggaggcagcacttgttgca
caaaatgccgttaatgtgttgaataaatcgcgtaaattaacaaaacgctatgaaataggt
attccaacttggacagggaagtttggtcaagcaggcataattaaaaagaaaagacatcca
caaattcaacgaagttcaaaaattctcgaaaacttaacaaaacccaaagatgatatcttc
aatgagaacaaatttccattggactcaaatgctgaattattggagcgcatcaggaagtat
ctccaagggcaaccgttatatttttcaaaatcggctgacgttgttaaacagcttcagcta
aagctgaaaaacgaggaagatcttattaatgttcgggcattattaaggggcattgcgact
ttcgacaaaggcatgtctgggtgggtgttgaaagatgagttccgaggtccttga
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