Eremothecium cymbalariae: Ecym_1440
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Entry
Ecym_1440 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K26122
E3 ubiquitin-protein ligase substrate receptor MMS22
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
erc04121
]
Ecym_1440
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_1440
Ubiquitin system [BR:
erc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul8 complex
Target recognizing subunit
Ecym_1440
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Ecym_1440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mus7
Motif
Other DBs
NCBI-GeneID:
11472950
NCBI-ProteinID:
XP_003644483
UniProt:
G8JM95
LinkDB
All DBs
Position
1:913370..917716
Genome browser
AA seq
1448 aa
AA seq
DB search
MDVDSIPDSLADDGEVVLWRPWADVPGMDSLQIEADDVRRSQAVVEMVPTLGPQRSLRKR
KAIQRMPYSLDRLRHRQLLQGYDISNFESLADNLNLPNISPIREGRESITEARTKNYRNV
DDRWLLESTQDVGKGTVGFGENGEDDEDQDESILFSRRPYQYRYGRSGFLSQGSELGSES
STSSTEADSDVESSEDMMVFRGKTINVKHGYRGILPKAAWEKSLHNDERRQLMKRSRERT
SGTTRRGLAKRKKGRPSNVHDEILLQDIVSDNQADRESSDPDLYQDHEAINKSSTFYELR
DYFDDKYSQLYKYDELSDDETKTEVNHIITNDNDVEQRQDERPAIVKSAQDLGSNGRDLN
MYMDLIYDSDYETEKEVIEFNDGIIDMMLNTTRKRKPRIQGKKSSNKIMNSKSNKNRLAH
RRIPKRSINTRRNISSNHSLATSSGRSLHLTQRNAEQKRSVDDEPESKTNLKKPPNKSGQ
MVITPDPLAVIYKKPKLFVPVIEGLSDNYILPRQSKKWHRGSNDISAEPTFKASSHLLDS
EVFNKILQGGDFQPPGSVIVHIATKTYVVSRLSTHTAEEIKAVFQHIVDIGAVNDEIVTI
SKQLCDVLCFINKPEIYDVIDEFHRNFRSKVDKLKDRAKPIHFYQISVCQFMLLEITKFN
NVSELTKISIEQKIMDHVVSFFKLLSRCFSIFTNTNGLELLIESYQILAIILSHISQLPA
LWERLQKQKFPPNVCEILVTMFPIKSSYWDIFKPEQTFNGITSWLRFIASCTDTPLSWKI
DNRLILQLYEYFKTRKFMDFEEESNIKSYPIFPSGNLHNRSTVFNSFLSLINKATLTPVI
LERITPIGTLHALYSTSLLVNRLNLLFILGTKVQHSYEKRFEELIEPYFRNGSPSSLKIP
QMELLLEAQYSIIEITLKNSIEVRGKSVNLLWKYVRKKSDAKIMKLWESFLGRLRNLFSK
FKTTSVLILKNMAPTLHNVLSGEFEYTLVENMLQLYLPNLNILGPEWVQHHLFRVLATPA
NKNFDILNHYCCVIKYLTETNVITWWSVVNYNLINGDDTIMLHYYTKICEYSDSSFFNQA
KDMLYSKVLDFLLKRTDQAFKLYLVALNRRDPRFQIDFNGNPTLSQLQMVKKTIRALHKA
SYDDLIVKFVSKVRDAYLNDASKRDFFYNTVNFLNNNFVDQIKDTHEFNYMKDEFGISDE
EAKKSSYRDYLISLGTDDARCIFIEKELMQMFAHGKDLTNLIVRLKSSLSLSVFDNALKA
FVDMISSHPFELGVSVLHMNSTYVLLRILNDYLEENCALVTSNEYYELIRLHLHFSDGPA
INFDQNTKSVSRLLLEIEIVKLQCLVVELSYGFAESSDIIRSQQYSASMKSSLECIDYPH
VINDGANQYLKAGVKGIFDNLLSTLTLKLPVEISFNGDKEALISRHNEVIDALISDFQNS
SEKGPLEN
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggattcaataccagattcactcgcagatgatggcgaggttgttttgtggagg
ccgtgggcggatgtgcctggtatggattctttacagatagaagctgacgatgttaggcga
tcacaggcggttgtagagatggtaccgacattggggcctcaaaggtctttaaggaaacgg
aaagctattcagagaatgccctatagtttggacaggttaagacatcgtcaattacttcaa
gggtatgatatttcgaattttgagtcattggctgataatctaaatcttcctaacatatca
ccaattcgcgaaggccgcgaaagcataacggaggcaaggactaaaaattatagaaatgtc
gatgatagatggctgctggaaagtacccaggatgtgggcaaggggacagtagggtttggt
gaaaatggtgaagatgatgaagatcaagatgagtcgattttgttttctagaaggccgtat
cagtatagatatggaaggagcggattcctttcgcagggctctgagctggggagtgagagt
agcactagcagtacagaagcagatagtgatgtggaaagttcagaggatatgatggtcttt
agagggaagactattaatgttaagcatgggtatcgagggatactaccgaaggcagcatgg
gaaaagtcgttgcacaacgatgagcggcgacagttgatgaaacgcagcagagaacgaaca
agcggaactacacgtagggggttggccaaaagaaagaaaggcagaccatcgaatgttcat
gatgaaatattgttacaagacattgtttcagacaaccaggcagatagggagtcgtctgat
cctgatttatatcaagaccatgaagcaataaacaagagtagcacattttatgaattacgg
gattactttgatgacaagtattctcaactttataaatatgacgaactttcagatgatgaa
actaagacagaagtaaaccatattattacaaatgataatgacgttgaacagagacaagat
gaacgccccgcgattgttaagtcggcgcaggatttgggttctaatggacgtgacttaaat
atgtatatggatttaatttacgattctgactatgaaacagaaaaggaagtaatagaattt
aatgatggtattatagacatgatgttgaatacgactaggaagaggaaaccaaggattcaa
ggtaaaaaatcctcaaataaaattatgaactccaaatctaataaaaatcgcctagctcat
cgaagaattccaaagagatcaattaacactaggagaaatatttcttcgaaccattcatta
gccacttcttcaggaagatctctgcacttaacccaacgcaacgccgaacaaaagcgtagc
gtagatgatgaaccagagtctaaaacaaacttaaagaaacctccgaacaaatcaggccaa
atggtcattactccagatccattggcagtaatatataagaaaccaaaactattcgtgcct
gtaattgaaggcttaagtgataattatatactgcccagacagtctaaaaaatggcacagg
ggttctaacgacatatcagcagaacctacatttaaagcttccagtcatctattagattca
gaggtatttaataagatcttacagggtggcgattttcaacctccaggttcagtcatagtc
catatagcgacaaagacctacgttgtttccagattatctactcatacagcggaagaaatc
aaagcagtattccagcatattgtagatataggggctgtaaatgatgaaatagttaccata
tcgaaacagctgtgtgatgttctttgttttatcaacaaacctgagatatacgacgtaatc
gatgaatttcatcgcaactttagatctaaagtcgataaattgaaagatagagcaaaacca
attcatttttatcaaatttctgtttgccaatttatgctacttgagatcacgaaattcaat
aacgtatcagaacttaccaagatatctatagaacaaaagattatggaccacgttgtttca
ttttttaagctgttatcacggtgttttagtatatttacgaacactaatggtctcgaactg
ctaatagaaagttaccagattttggccatcatacttagtcacatttctcagttgcctgca
ttatgggaacggctacagaagcagaagttcccgccaaatgtttgtgagattctcgtgaca
atgtttccaattaaatcgtcgtattgggatatcttcaagccagaacaaactttcaatggt
attacttcttggttaaggtttatcgctagctgtacagatacacctctaagttggaaaatt
gataaccggttgattttacagctttacgaatattttaaaactagaaaattcatggacttc
gaggaagaatcaaatatcaaatcatatccgatatttcccagtggtaatttacacaacaga
agcacagtatttaactcttttttgagtttaattaataaagcaacgttaacacctgtcata
ttagaaaggataacaccaataggcacacttcatgctttgtattccacttcattgttagtg
aataggttaaatttattattcatattaggcactaaagtccaacatagttatgagaagagg
tttgaagagttaattgaaccgtactttagaaatgggagtccaagttctctcaaaattccc
caaatggagttactgctagaagcacaatattcaatcattgaaataacattaaaaaatagc
attgaggtaagaggaaagtcagtcaatttactttggaaatacgtaagaaaaaagagtgat
gcaaagataatgaagctttgggaaagttttcttggtaggctaagaaatcttttttctaaa
ttcaaaaccacatcggttttgatcttaaagaatatggcaccaaccttacacaacgtatta
tccggcgagtttgaatatactttggttgaaaacatgttacaattatatctccccaactta
aatatattaggtcctgaatgggttcagcaccacttgtttcgagtactagcaacaccagca
aataaaaatttcgacattttaaatcattattgctgtgttattaaatacttaacagaaacc
aatgttattacttggtggtctgttgtgaactacaacttgataaatggagatgacaccata
atgttacattattacacgaagatctgcgaatatagcgacagttcattttttaatcaagca
aaagacatgctgtattcaaaggttctcgattttttacttaagaggactgatcaagcattt
aaattatatttagtggcgttgaatcggagagatcctcgtttccagatagatttcaatggt
aatccgactttgtctcaacttcaaatggttaaaaaaaccattagagctctacacaaagca
tcatatgatgatttaatagtaaaatttgtttctaaggtaagagatgcttaccttaatgat
gcttctaagagagattttttctataatactgtgaattttttgaataataactttgttgat
caaattaaagatacgcatgaattcaattatatgaaggatgaatttggaatatctgatgaa
gaagccaaaaagagttcatatagggattatctgatatccttaggaactgatgacgcaaga
tgcatattcatcgaaaaggaactaatgcaaatgttcgcacacggaaaggacttaacaaac
cttattgtaaggttgaagtcgtcactaagtttatcggtttttgataatgcgttaaaagca
tttgtagatatgataagttcacatccatttgaactcggagtaagcgttttgcatatgaat
tcaacatatgtactacttcgtatacttaatgactacttggaagagaattgtgcactggtt
acatcaaacgaatattatgaattaattaggctacatctccattttagtgacggtcctgca
attaatttcgaccaaaacacaaaatctgtctcccggctacttctagaaattgaaatagtt
aaattacaatgcttagttgttgaattgtcctatggatttgctgaatcctcagatataata
cgctctcaacaatattccgctagcatgaaaagttcactagaatgcatagactatccacat
gttatcaatgatggtgcaaatcaatatttgaaagcaggggttaagggcatttttgataat
cttttgtcaacgttaactttaaaattaccagttgagatatcatttaacggtgataaagaa
gcccttatttctagacataatgaagtaatcgacgctttgataagcgatttccaaaactcg
tccgaaaaaggccctttagaaaattaa
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