Eremothecium cymbalariae: Ecym_2190
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Entry
Ecym_2190 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erc03016
]
Ecym_2190
Enzymes [BR:
erc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Ecym_2190
Transfer RNA biogenesis [BR:
erc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ecym_2190
Prokaryotic type
Ecym_2190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
11473029
NCBI-ProteinID:
XP_003644756
UniProt:
G8JP34
LinkDB
All DBs
Position
2:complement(374901..376616)
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AA seq
571 aa
AA seq
DB search
MNQAHLNHHNRIYRLGCCSSKDRFALYWNIDIIVPKVLFLNYMAEVTLQTTYDEDQPNEV
AYKRGAKYKQTKARKADYDNSRDSKKSRNDETPTVALADDGSKEIRLPKKKVAVMVGYCG
TGYHGMQYNPPNPTIEAALFDAFVKAGAISKANSTDLKKNGFMRAARTDKGVHAGGNVIS
LKLIIEDSSIREKINDILPPSIRVWSINRVNKAFDSRKLCSSRWYEYLLPTYSLIGPKPG
SYLYQEVEQSKEELPNVLDDDEESVQFWKSFEKTVKATFTEQELQEIVEYTPPSREAFDE
SNDLYQKVKQYKKIENSHRRAYRVSESKLNKFRSSLEQYLGHHNFHNFTLGKDFKDPSAC
RFIKEVTVSEPFVIGDMKTEWVSIKIHGQSFMLHQIRKMISMATLITRCGCPISRISQAY
GPQKINIPKAPALGLLLEFPVYDGYNKRLEEFGYEPINFSKYQRDIDSFKMVHIYDKIYK
EEVDENVFNAFFSYIDAFSQVTGAQGDETKIDNPIKVQKSIFDFLTARGIPTIEQNAEKE
NHDAPSVTTAMPTENNNTESVAETNNETGSS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagctcatcttaatcaccacaacagaatatataggctgggttgttgtagctca
aaggataggtttgctttatattggaacatagatatcattgttcctaaggttctttttttg
aattacatggctgaagttactttacaaactacgtacgatgaagatcaaccaaatgaagtt
gcttacaagagaggtgcaaagtataagcaaactaaggcacggaaggcagattatgacaac
tctagagactctaaaaagtctcgtaacgatgaaactccgacagtggctttagctgatgat
ggttccaaggagatcaggttgccaaagaaaaaggttgctgtgatggttggatactgtggc
acaggctatcatggcatgcagtataacccacctaacccaacaattgaagctgcattattt
gatgcttttgtgaaggccggtgcgatttcgaaagctaattccactgatttgaaaaaaaat
ggatttatgagagctgctaggacggataaaggtgttcatgcaggtgggaatgtgatctct
ttgaaattaattatcgaagattcaagtattcgggagaagatcaatgacattcttcctcct
agtatcagggtgtggagtatcaaccgtgtcaacaaggcctttgattctcgtaaattatgc
agttcgagatggtatgaatatttgttaccaacttattctttgattggtccgaaacctggc
agctacctataccaggaagtcgagcaaagtaaagaagagcttccaaatgttttagacgac
gatgaagagtctgtacagttctggaagtcctttgaaaagacagttaaggctacttttaca
gaacaagaactacaagaaatagtcgaatatacccctccaagcagagaagcgtttgacgag
agcaatgacttgtatcaaaaagtaaagcaatacaagaaaatagagaattcccaccgtaga
gcataccgtgtttcagaaagtaaattgaacaagtttcgctcctcactagaacaatatttg
ggccaccataacttccacaatttcaccctaggcaaggacttcaaggatcctagcgcatgt
cggttcataaaggaagtgactgtgtcggagccgtttgtcattggagatatgaagacagaa
tgggtttctattaaaatccatggacaatcttttatgctacatcaaattcgtaagatgatc
tctatggccactttaataacccgctgcggatgcccgataagccgtatttctcaagcatat
ggtcctcagaagattaatattcccaaggcccccgctttaggactcctgttagagttcccc
gtctatgatggctacaataaaaggttagaagagtttggctatgaacccatcaatttcagt
aaatatcaaagagatattgatagtttcaagatggtgcacatctatgacaagatctacaaa
gaagaggtggatgagaatgtgtttaacgcatttttcagctacatagacgctttcagtcaa
gttacaggtgctcaaggagatgagactaaaattgataatcccattaaagtacaaaagagt
atattcgactttttaactgcaagagggataccaaccattgaacaaaatgctgagaaggaa
aatcacgacgcgccaagtgttactacagccatgcctacagaaaacaataatacagaaagc
gttgctgagaccaataatgaaaccggttcatcttag
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