KEGG   Eremothecium cymbalariae: Ecym_2246
Entry
Ecym_2246         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
erc  Eremothecium cymbalariae
Pathway
erc03013  Nucleocytoplasmic transport
erc03015  mRNA surveillance pathway
erc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Ecym_2246
  09122 Translation
   03013 Nucleocytoplasmic transport
    Ecym_2246
   03015 mRNA surveillance pathway
    Ecym_2246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_2246
   03041 Spliceosome [BR:erc03041]
    Ecym_2246
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     Ecym_2246
Spliceosome [BR:erc03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    Ecym_2246
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 11470572
NCBI-ProteinID: XP_003644809
UniProt: G8JPN7
LinkDB
Position
2:485381..486091
AA seq 236 aa
MSLAEFDELRWDHSCDRLDVPSNYLKRKARKTPSGLEELRKSMVSATIYVGNLSFYTSEE
QLYELFNKCGTIERIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYLSKTKLDDREITID
LDPGFEEGRQFGRGKNGGQVSDELRFEYDASRGGFYVPLENRIGTVNNFGARRIREPNKG
HYHHVHHHHHHHHHQHHQQHQQHQQQHQTAAVAVAVPAKVNPMEVEEELDSYIPGQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcactagcagaatttgatgagttgagatgggatcattcttgtgatcgactagatgtg
ccatcgaactatttgaaacgcaaagcgaggaaaacgccttctgggcttgaagaacttcgt
aaatctatggtttcggcaacgatatatgtcggtaatctttctttctatacatctgaagaa
cagctatatgaactctttaacaagtgcggaactattgagaggattattatgggtttggat
cgttttaagtttactccatgtgggttttgcttcataatttatcaaactcctcaggaggcg
ctagctgcgctgaagtacttatcgaagaccaagctagacgaccgagagattactattgat
ttggatcccggttttgaagaaggccgtcaatttggcaggggtaaaaatggagggcaagta
agtgatgagttgaggtttgagtatgatgcttctagaggagggttttatgttcctttggaa
aacaggattggtacagtgaataactttggagcaaggcgtattcgtgaaccaaataaggga
cactatcatcatgttcatcaccatcaccaccatcaccaccatcaacaccatcaacagcac
cagcagcatcaacaacaacaccaaacagcagcggtagcggtagccgtgccagctaaggtg
aatccaatggaagtagaggaagagttagatagttatattccaggtcaatga

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