Eremothecium cymbalariae: Ecym_2246
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Entry
Ecym_2246 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
erc
Eremothecium cymbalariae
Pathway
erc03013
Nucleocytoplasmic transport
erc03015
mRNA surveillance pathway
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_2246
09122 Translation
03013 Nucleocytoplasmic transport
Ecym_2246
03015 mRNA surveillance pathway
Ecym_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_2246
03041 Spliceosome [BR:
erc03041
]
Ecym_2246
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
Ecym_2246
Spliceosome [BR:
erc03041
]
Common components
Common spliceosomal components
Cap binding complex
Ecym_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
11470572
NCBI-ProteinID:
XP_003644809
UniProt:
G8JPN7
LinkDB
All DBs
Position
2:485381..486091
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AA seq
236 aa
AA seq
DB search
MSLAEFDELRWDHSCDRLDVPSNYLKRKARKTPSGLEELRKSMVSATIYVGNLSFYTSEE
QLYELFNKCGTIERIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYLSKTKLDDREITID
LDPGFEEGRQFGRGKNGGQVSDELRFEYDASRGGFYVPLENRIGTVNNFGARRIREPNKG
HYHHVHHHHHHHHHQHHQQHQQHQQQHQTAAVAVAVPAKVNPMEVEEELDSYIPGQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagcagaatttgatgagttgagatgggatcattcttgtgatcgactagatgtg
ccatcgaactatttgaaacgcaaagcgaggaaaacgccttctgggcttgaagaacttcgt
aaatctatggtttcggcaacgatatatgtcggtaatctttctttctatacatctgaagaa
cagctatatgaactctttaacaagtgcggaactattgagaggattattatgggtttggat
cgttttaagtttactccatgtgggttttgcttcataatttatcaaactcctcaggaggcg
ctagctgcgctgaagtacttatcgaagaccaagctagacgaccgagagattactattgat
ttggatcccggttttgaagaaggccgtcaatttggcaggggtaaaaatggagggcaagta
agtgatgagttgaggtttgagtatgatgcttctagaggagggttttatgttcctttggaa
aacaggattggtacagtgaataactttggagcaaggcgtattcgtgaaccaaataaggga
cactatcatcatgttcatcaccatcaccaccatcaccaccatcaacaccatcaacagcac
cagcagcatcaacaacaacaccaaacagcagcggtagcggtagccgtgccagctaaggtg
aatccaatggaagtagaggaagagttagatagttatattccaggtcaatga
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