KEGG   Eremothecium cymbalariae: Ecym_2509
Entry
Ecym_2509         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
erc  Eremothecium cymbalariae
Pathway
erc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ecym_2509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_2509
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Ecym_2509
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     Ecym_2509
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 11468264
NCBI-ProteinID: XP_003645047
UniProt: G8JPX2
LinkDB
Position
2:complement(993339..996017)
AA seq 892 aa
MSFFGFDKKGSRNGSQEEDPNKELDFEETYQGFGEHEEEEDDYLNAETFGDGADLGNDFD
FGYGKDSVSKANSATVNSSYVQPTVSYAAAASSQPQKFDENVDLKPMESLWSNQSLQTPA
QPPNQGVLSYQHVGRQQPKQQQSPQQQQSPQQSQAIPPPPQQAQIAMPPPHGFIGMQPQG
IPPPGYAFAPQGYVQQHPQQYQYAPQGMPPQFQHIPIIMNQQLTQSQGSKPQQVQPPMPP
QIAMPPPPPPGLLQELPQHQQPSAVISPQQACTQLAEQQPQQQPQQQPQQEQQEQQQEQQ
QEQQQEQQHLSPPFQRQSPLSQRGLVSPSQQNEILTPPHTPREFRRSTMRRHHEPLTEEE
QKRLQIRQAKVDKILRHSGVMTPRDKDFITRYQLSQIVTEDPYNEDFYFQVYKIIQRGGI
VGESNKGLIARAYLEHSGHRLGGRYKRADVALQRMQSQVEKAVTVAKERPQKNKDLDSAK
EGVLGKISSTMNSRAPRRQLQIPTHKEDESDHDVLSAVSSSALDEVNHSLESVDISKSRV
RRRSSYIFSSMDQSSILSRSGGRKFVLSLIESIYKEVLELEAQLRSGKQAEATKLWEVLH
IDDDSHEVSPFISILSFDKGVKIMPRIMNFLSKEQKMKLFSCFFNELSHLNIIVKSSYKT
NPMPTDSQLKKIELFQSAFLKIIVSFLSNSAEFIEVIGLLLCLIRNNNISFISTSKIGLN
LITVLISRAALIKQDINRGNASSMAELSTWNEIYDKLFTSLETKLLAVFPPKEYMDAIIS
VTYQALGSGSSNSGSGETPQPLNYSLPQFYDQSYIWQFFASLALSGKLNHQRIIIDEIRD
EIFGTISRAEELSNQSQDPSFAYQKDKMYQDLNLFLNVIGLVARDGEISELK
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgtccttttttgggttcgataagaaaggctctcgtaacggatcccaggaggaagatcct
aataaagaattggattttgaagaaacataccaaggctttggtgaacacgaggaggaagaa
gacgattatttaaatgctgagacatttggtgatggtgcagatttaggtaatgattttgat
tttggttatggaaaggattctgtgtcaaaggcgaatagcgcgaccgtaaattcatcgtat
gttcagcctacggtttcttatgcagcagcagcttcttctcaacctcagaagtttgatgaa
aatgtagatttgaagccaatggaatctctatggagcaaccaatctttgcaaactcctgca
caaccacctaatcaaggggtactttcctatcagcatgtagggaggcagcagcctaagcag
cagcagtctccacagcagcagcagtctccacagcaatcgcaggctattccaccccctcca
caacaagcccagatagctatgccgcctcctcatggttttattggtatgcaacctcaggga
attcctcctccaggctatgcttttgcccctcagggttatgttcagcagcaccctcaacag
tatcaatatgctccacagggaatgccaccccaatttcaacacattcctatcattatgaat
cagcagctcacacaatctcaaggttccaagcctcagcaagtgcagcccccaatgccacct
caaattgctatgccgccaccgccaccgccaggtctgctacaagagctcccacagcatcag
caaccttctgcggttatatccccgcagcaggcatgtacccagctagctgaacaacaacca
cagcaacaaccacagcagcaaccacagcaagaacaacaagaacaacaacaagaacaacaa
caagaacaacaacaagaacaacaacacctttcacctccttttcaacggcaatctccactt
tctcaacgtgggttggtgtcaccttctcagcaaaatgaaatccttactcctccacatact
ccaagggagttccgtcgtagcactatgaggagacaccatgaaccacttactgaagaagaa
caaaagcgcctgcaaatccgccaggctaaggtcgacaagattttgagacactcaggtgtt
atgactccccgtgataaggactttattactcgttatcaattatcacaaattgtgaccgaa
gatccttataacgaagatttctacttccaggtctataaaataattcaacgcggtgggatc
gttggagaatcaaataaaggcttaattgctcgagcttacttagaacactctggacaccgc
ctgggggggcgttataagcgtgcggatgttgcacttcaacgaatgcagtcgcaggttgaa
aaggctgttaccgtcgccaaggaaaggcctcaaaagaacaaggatttagatagcgccaag
gaaggtgtgttgggcaagatatcctctactatgaactctagagcgcctcgcaggcagcta
caaattcctactcacaaggaagatgaatctgatcatgatgtgttgtcagctgtatcttcg
agcgctttagatgaagtgaatcactctttggagagtgtagacatcagcaagtccagagtc
agaaggagatcgtcttatatctttagttctatggaccaaagttctattttgtcgcgttct
ggaggtagaaagtttgtgttgtctctgattgagtcaatatataaagaagttttggaatta
gaagcacagttaagaagtggcaaacaggctgaagctactaagctatgggaggttctacac
attgatgatgattcccacgaagttagtccattcatttctattctatcatttgacaagggt
gtaaaaataatgcctagaatcatgaactttttatccaaagaacagaagatgaaattgttt
tcttgtttcttcaatgagctatctcatcttaatatcattgtgaagagttcttacaagacg
aatccaatgccaacagattctcagttaaagaaaattgaactattccagtctgcatttttg
aaaattattgtttcatttttatcaaatagcgccgaatttatcgaagttatcggcttactt
ttgtgtttgattagaaacaacaatatatcgttcataagcacttcaaagattgggttgaac
ttgattactgtgttgatctctcgtgctgcgttaatcaaacaagatattaatagaggcaat
gcctcttctatggcagaactatctacttggaatgaaatttatgataaattattcacctct
ctcgagaccaaattattggctgttttcccacccaaggagtatatggatgctattatcagt
gtcacctaccaagctcttggcagcggtagctcgaattccgggtcgggtgagacgccccaa
ccgctaaactattctttacctcagttctacgaccagtcgtacatttggcaattttttgct
tctttggctttatcaggaaaactaaaccatcaaaggattattattgatgaaattagggat
gagatatttggtactatctccagagccgaagaattaagtaaccaatcacaagacccatcc
ttcgcctaccagaaagataagatgtatcaagatttgaatttgtttttgaacgttattggc
ttggttgctcgtgacggtgaaataagtgagctaaaataa

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