Eremothecium cymbalariae: Ecym_2619
Help
Entry
Ecym_2619 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
erc
Eremothecium cymbalariae
Pathway
erc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ecym_2619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erc03021
]
Ecym_2619
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_2619
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Ecym_2619
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Ecym_2619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
DUF4905
Motif
Other DBs
NCBI-GeneID:
11470737
NCBI-ProteinID:
XP_003645149
UniProt:
G8JQJ9
LinkDB
All DBs
Position
2:complement(1197646..1198275)
Genome browser
AA seq
209 aa
AA seq
DB search
MSVIHPDTANYPFRFAPFLRQEYSFSLDPDRPVCQYYNSKEGASSCPNGTLCPNKHVLPI
FQNKIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFFTKNGYCTQSPECQYLHIDPNSK
IQECEDYKMGFCPLGPSCTRKHVKKIICQKYVTGFCPVGKECDWEHPRFMVPNELSKLRI
KRDDEINTKKLDEEKERRLNAIINGELVI
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaatacatcctgatactgctaactacccctttcggtttgctcctttcctgcgc
caagagtattcattttccttagaccctgaccggccagtttgccagtactacaattctaaa
gagggggcatcttcatgtcctaatggtactctatgtccaaataagcatgttcttcctatc
ttccagaataagatagtgtgtaagcattggttgcgggggttgtgcaagaagaatgaccaa
tgtgaatatttgcatgaatataacctacgaaaaatgccggaatgtgtattcttcacaaag
aatggttactgcactcagagtccagagtgccagtatttgcatattgatcccaactccaag
atacaggagtgcgaggattataagatggggttctgtccgctaggtccaagctgtactcgg
aagcatgtgaagaagattatttgtcagaaatacgtcacagggttctgtcccgtaggaaag
gaatgtgattgggaacaccccaggtttatggtaccgaacgagttgagtaagctaagaatc
aagagagatgacgaaataaataccaagaaattagatgaggagaaagaaaggaggttgaat
gctattattaatggggaactagtaatatga
DBGET
integrated database retrieval system
