KEGG   Eremothecium cymbalariae: Ecym_2808
Entry
Ecym_2808         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
erc  Eremothecium cymbalariae
Pathway
erc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Ecym_2808
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:erc03041]
    Ecym_2808
Spliceosome [BR:erc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    Ecym_2808
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_Aladin Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 NBCH_WD40 CFAP251_N WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_NOL10_N PAC11 Beta-prop_IFT140_1st WDR54 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_DCAF4 ASA1 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR41 eIF2A Cytochrom_D1 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N WD40_like PSII_BNR
Other DBs
NCBI-GeneID: 11468577
NCBI-ProteinID: XP_003645322
UniProt: G8JQE2
LinkDB
Position
2:1568103..1569500
AA seq 465 aa
MVGLDDIKVDHNHKIGNNGETVADALKRLEFQRQQRMFLLPTLDEEVRAALNWLHKPEEL
KNEDQLSRRERLAELLYSDDELLTRFKASPFGYNAKGQSETSEDLGEGKAEEEEFYTPAS
WQLIESRKSIIKYSMENAHARLLRQRRIAENLSIKKLLSGRRNLNKKLRTLELAGSQLVA
EKPVSEVCVSKDDVYVASGNWGGHIKVLNSDTLDIVKSFDNVHSGKVCGLDWHPTANSLL
SGGADNLVKITNLDQGSCAELKDHVGRVCKVKFHPSGKFAASASFDMTWILWDLEKALAI
QLQEGHSREVFTLGFQTDGSLLASGGLDSIGLIWDLRSGEPIMNLVGHQKPIYGLDWSPN
GYQVATASGDGSIKIWDLRKQSIVSTLLAHRNVAFDIKFDKANGHFLVSGGYDRELKIFN
ADNWELIKTLEGHTDKILSVDLVSDGSKFFSTGWDRTVKQWTLSS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggttggattagatgatataaaggttgatcataatcataaaataggcaataatggtgaa
acagttgcagatgctttgaaaagacttgaatttcagagacaacagcgaatgtttttactg
cccacgcttgatgaggaagtacgggctgcgttgaattggttgcacaagccagaggaactg
aaaaatgaggatcaactgtccaggcgtgaaagactggctgaacttttatactctgacgat
gaattgcttactcggttcaaggcatcaccctttggatataatgcaaaaggtcaatcggaa
acttctgaagacctcggagaaggtaaagcagaagaagaggaattctacacaccagcaagc
tggcagttgatagagtcccgaaaatctattataaaatattcaatggaaaatgcccacgcc
aggcttctgcgtcaaaggcgtatagctgagaatctctccattaagaaacttctgtctggt
agaagaaatctcaataagaaattgcgaactttagaattagctggatctcagttagtagcg
gaaaaaccggtttcagaagtctgtgtttctaaggatgatgtttacgttgccagtgggaac
tggggtggtcacatcaaggttttgaacagcgataccctggatatagtaaaatcttttgat
aatgttcattcaggtaaagtttgtgggttggactggcatcctacagcaaatagccttcta
tcaggaggtgcagataatcttgtaaaaattactaatctagatcagggatcgtgtgccgaa
ttaaaggaccatgtcggaagagtctgtaaagtgaaatttcatcctagtggaaaatttgct
gccagtgcctcattcgatatgacatggatcctatgggatttagaaaaggcactagctatt
caattacaagagggacattctagagaagttttcacgcttggatttcaaacggacggttca
ttgctagccagtggcggcttagactccattggtctcatctgggatcttagatcgggagaa
cctataatgaatttggttggtcatcagaagcccatttatggcctagattggtcgccaaat
gggtatcaggtcgccactgcaagcggagatggttctataaaaatctgggatctacgaaaa
cagagcattgttagtactctactagcccacaggaatgttgcctttgatatcaaatttgat
aaagcaaacggacactttttggtttcagggggctatgaccgagaacttaagatatttaat
gctgataactgggagttgattaaaactcttgaaggacacacagataagatactttctgtg
gacttagttagcgacggttcaaaattctttagcactgggtgggatcgaactgtgaaacaa
tggacacttagtagttga

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