KEGG   Eremothecium cymbalariae: Ecym_3012
Entry
Ecym_3012         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
erc  Eremothecium cymbalariae
Pathway
erc03082  ATP-dependent chromatin remodeling
erc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    Ecym_3012
   03083 Polycomb repressive complex
    Ecym_3012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:erc03036]
    Ecym_3012
Chromosome and associated proteins [BR:erc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     Ecym_3012
  Histone modification proteins
   HAT complexes
    HATB complex
     Ecym_3012
   HDAC complexes
    Sin3A-HDAC complex
     Ecym_3012
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     Ecym_3012
    PRC2.2
     Ecym_3012
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     Ecym_3012
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    Ecym_3012
  Chromatin remodeling factors
   NuRD complex
    Ecym_3012
   NuRF complex
    Ecym_3012
   NuRF complex (fruit fly)
    Ecym_3012
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I WD40_RFWD3 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD_LRWD1 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_DCAF12 CNH Beta-prop_HPS5 Beta-prop_DCAF4 TAF1C_beta-prop WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 11470852
NCBI-ProteinID: XP_003645348
UniProt: G8JQW2
LinkDB
Position
3:complement(24573..25766)
AA seq 397 aa
MMEYEEIEHDESPLTVDQEYELWKSNVSLMYDFVSETKLTWPSLSIQWLPSVDANVPLKQ
QEMILGTHTSGDENNYLKIAAIDLPYEVVGLPDEDNSSEPVKSMIKVTKKFEHEDEVIRA
RYMPKNDKIIATINGKGKIFIYDRSKSKSEGLCKTLSYHKDNGYGLAFNPQIEGELLSAS
DDTTVALWDINSTDRPVSIVMNHTDIVNDSKWHEFDENIFGTVSEDKTLQVHDKRSLSNS
AQVLPVEKPLNALAFSKHSKNLIAAAGTDTRVYLYDLRRLSEPLHTMAGHQDAVTSIEFS
SHKDGILCSSGSDRRLFIWDLTQIGAEQAQEDADDGVPELMMMHAGHRSAINDFSFNPQV
PWLIASAEEDNVVQVWKISKKLVSNIIPEYTDLKSLE
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgatggaatacgaggaaatagaacatgatgaaagccctttaacggttgatcaggagtat
gaactctggaagtcaaatgtttctttaatgtatgactttgttagtgaaactaaattgaca
tggccgtcattatctattcaatggctaccttctgttgatgccaatgtcccattaaaacaa
caagaaatgattttaggtacccatacatctggagatgaaaataattacttgaaaattgct
gcgattgaccttccatatgaagtagttggccttccagatgaggataattcctctgaacca
gtcaaatctatgattaaagttactaaaaaattcgaacatgaagatgaagttattcgagca
agatacatgcccaagaatgataaaataattgctacaattaatggtaaaggaaaaattttc
atctatgatagatcgaagagcaaatctgaaggattgtgcaaaactctatcataccataaa
gacaacgggtatgggttagcgtttaatccacagattgaaggggagcttctatccgcatct
gacgatactacggtggcattatgggatataaattcgacagataggccagtaagtatagta
atgaaccacactgatatagtgaatgactcaaaatggcatgaatttgacgaaaatatcttt
ggtacagtgtcagaagataaaacacttcaagtacatgacaagagatccctctctaattct
gctcaagttcttcctgtggaaaagccactgaatgctctggcatttagcaagcacagtaag
aatctcatagcagctgcaggaactgataccagggtatatctatacgatttgagacgcctc
tcggaaccattgcatactatggctggacatcaagatgcagtgaccagcatagagttctct
tctcacaaggatggaattttatgctccagtggatcagacagaagattattcatttgggac
ctcactcaaattggtgctgaacaggcacaggaggatgctgatgatggtgtaccggagttg
atgatgatgcacgcgggtcacaggagtgcaataaatgatttttctttcaatccacaagtt
ccttggttaattgcaagcgctgaagaagacaatgtggtacaagtttggaaaatatctaaa
aagctggtttctaatatcatacctgaatatacggatttaaagtctttagaatag

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