Eremothecium cymbalariae: Ecym_3012
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Entry
Ecym_3012 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
erc
Eremothecium cymbalariae
Pathway
erc03082
ATP-dependent chromatin remodeling
erc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Ecym_3012
03083 Polycomb repressive complex
Ecym_3012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_3012
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
Ecym_3012
Histone modification proteins
HAT complexes
HATB complex
Ecym_3012
HDAC complexes
Sin3A-HDAC complex
Ecym_3012
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
Ecym_3012
PRC2.2
Ecym_3012
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
Ecym_3012
Heterochromatin formation proteins
Other heterochromatin formation proteins
Ecym_3012
Chromatin remodeling factors
NuRD complex
Ecym_3012
NuRF complex
Ecym_3012
NuRF complex (fruit fly)
Ecym_3012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF12
CNH
Beta-prop_HPS5
Beta-prop_DCAF4
TAF1C_beta-prop
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
11470852
NCBI-ProteinID:
XP_003645348
UniProt:
G8JQW2
LinkDB
All DBs
Position
3:complement(24573..25766)
Genome browser
AA seq
397 aa
AA seq
DB search
MMEYEEIEHDESPLTVDQEYELWKSNVSLMYDFVSETKLTWPSLSIQWLPSVDANVPLKQ
QEMILGTHTSGDENNYLKIAAIDLPYEVVGLPDEDNSSEPVKSMIKVTKKFEHEDEVIRA
RYMPKNDKIIATINGKGKIFIYDRSKSKSEGLCKTLSYHKDNGYGLAFNPQIEGELLSAS
DDTTVALWDINSTDRPVSIVMNHTDIVNDSKWHEFDENIFGTVSEDKTLQVHDKRSLSNS
AQVLPVEKPLNALAFSKHSKNLIAAAGTDTRVYLYDLRRLSEPLHTMAGHQDAVTSIEFS
SHKDGILCSSGSDRRLFIWDLTQIGAEQAQEDADDGVPELMMMHAGHRSAINDFSFNPQV
PWLIASAEEDNVVQVWKISKKLVSNIIPEYTDLKSLE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatacgaggaaatagaacatgatgaaagccctttaacggttgatcaggagtat
gaactctggaagtcaaatgtttctttaatgtatgactttgttagtgaaactaaattgaca
tggccgtcattatctattcaatggctaccttctgttgatgccaatgtcccattaaaacaa
caagaaatgattttaggtacccatacatctggagatgaaaataattacttgaaaattgct
gcgattgaccttccatatgaagtagttggccttccagatgaggataattcctctgaacca
gtcaaatctatgattaaagttactaaaaaattcgaacatgaagatgaagttattcgagca
agatacatgcccaagaatgataaaataattgctacaattaatggtaaaggaaaaattttc
atctatgatagatcgaagagcaaatctgaaggattgtgcaaaactctatcataccataaa
gacaacgggtatgggttagcgtttaatccacagattgaaggggagcttctatccgcatct
gacgatactacggtggcattatgggatataaattcgacagataggccagtaagtatagta
atgaaccacactgatatagtgaatgactcaaaatggcatgaatttgacgaaaatatcttt
ggtacagtgtcagaagataaaacacttcaagtacatgacaagagatccctctctaattct
gctcaagttcttcctgtggaaaagccactgaatgctctggcatttagcaagcacagtaag
aatctcatagcagctgcaggaactgataccagggtatatctatacgatttgagacgcctc
tcggaaccattgcatactatggctggacatcaagatgcagtgaccagcatagagttctct
tctcacaaggatggaattttatgctccagtggatcagacagaagattattcatttgggac
ctcactcaaattggtgctgaacaggcacaggaggatgctgatgatggtgtaccggagttg
atgatgatgcacgcgggtcacaggagtgcaataaatgatttttctttcaatccacaagtt
ccttggttaattgcaagcgctgaagaagacaatgtggtacaagtttggaaaatatctaaa
aagctggtttctaatatcatacctgaatatacggatttaaagtctttagaatag
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integrated database retrieval system