Eremothecium cymbalariae: Ecym_3140
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Entry
Ecym_3140 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_3140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_3140
03110 Chaperones and folding catalysts [BR:
erc03110
]
Ecym_3140
03029 Mitochondrial biogenesis [BR:
erc03029
]
Ecym_3140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
erc04147
]
Ecym_3140
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ecym_3140
Messenger RNA biogenesis [BR:
erc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ecym_3140
Chaperones and folding catalysts [BR:
erc03110
]
Heat shock proteins
HSP60 / Chaperonin
Ecym_3140
Mitochondrial biogenesis [BR:
erc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ecym_3140
Exosome [BR:
erc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ecym_3140
Exosomal proteins of other body fluids (saliva and urine)
Ecym_3140
Exosomal proteins of breast cancer cells
Ecym_3140
Exosomal proteins of colorectal cancer cells
Ecym_3140
Exosomal proteins of bladder cancer cells
Ecym_3140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
11468697
NCBI-ProteinID:
XP_003645461
UniProt:
G8JR75
LinkDB
All DBs
Position
3:260792..262483
Genome browser
AA seq
563 aa
AA seq
DB search
MLRSNNCKQALKGLRFYSHKEVKFGVDGRAALLKGVETLEQAVSSTLGPKGRNVLIEQPF
GPPKITKDGVTVAKAITLEDKFENMGAKLLQEVASKTNEAAGDGTTSATVLGKAIFTESV
KNVAAGCNPMDLRRGTQAAVEKVIEFLSKNKKEITTSEEIAQVATISANGDAHIGKLLAS
AMEKVGKEGVITIREGRTMEDELEVTEGMRFDRGFISPYFITDAKAGKVEFEKPLVLLSE
KKISSIQDIIPSLEISNQTRRPLLIIAEDIDGEALAACILNKLRGQVQVCAVKAPGFGDN
RKNTLGDIAALTGSTVFTEELDLKPENATSEHLGSADSITITKEDTVILNGNGTKESIEH
RIEQIKGAINATTTNSYEKEKLQERLAKLSGGVAVIRVGGSSEVEVSEKKDRYDDALNAT
RAAVEEGILPGGGVALLKASRILHEVKTENFDQHLGVQIIKKAITKPAKKIIENAGEEGS
VIVGKIIDEFGDNFTKGYDAAKGEYTDMLVAGIIDPFKVVRSGIVDASGVASLLATTEVA
IVDAPKPPSAAPPAGMPGMPGMM
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctaataattgcaaacaggctttgaaaggtttgcgtttttactctcataag
gaggtaaagttcggtgttgatggcagggcagcgttgttgaaaggtgttgagacgcttgag
caggcggtttcttctactttggggcctaaaggtagaaatgttttgattgaacagcccttt
gggccgcccaagattaccaaggatggtgtgacggttgccaaggctattaccttggaggat
aagtttgagaatatgggtgctaagttgttgcaggaggttgcatcgaagaccaatgaagct
gccggggatggtaccacttctgctactgttttgggtaaggctattttcacggaatctgtc
aagaatgtggcggctgggtgtaatccaatggatttgagaagaggtactcaggcggctgtg
gaaaaggtgattgagtttttgagcaagaataagaaggagattactacttctgaggagatt
gcacaggttgcgactatctctgcgaatggtgatgcgcacattgggaagctgttggcttct
gcgatggaaaaggttggcaaggagggtgtgatcactatcagggagggtaggaccatggag
gatgagttggaagtgactgaaggtatgagattcgaccgtgggtttatttctccctatttc
attactgatgccaaggctggtaaggttgaatttgagaagccattggtgttgctttctgaa
aagaagatctcttcgatccaggatattatcccgtcgttggagatttctaaccaaaccagg
agaccattgttgattatcgcggaggatattgacggcgaggcgttggctgcttgtatattg
aataagttaagaggccaagtccaggtttgtgctgtcaaggcaccaggcttcggtgacaac
agaaagaacaccttgggagacattgcggccttgaccggtagcactgtgttcacagaggag
ttggacttgaaaccagaaaacgccacttcggaacatttgggttctgcggactccattacc
attaccaaggaggatactgttatcttgaacggtaatggaaccaaggagtccatcgagcat
agaattgagcagattaaaggtgctattaacgccaccactaccaattcttatgagaaggaa
aagttgcaggaacgtttggctaaactatctggtggtgtcgccgtgatcagagtgggtggt
tcctcagaggtggaagtcagtgaaaagaaagaccgttatgacgatgccctaaacgccact
agagccgccgtggaagaaggtattctaccaggtggtggtgttgccttgctaaaggcttcc
agaatcttgcacgaggtgaaaactgaaaacttcgaccagcatttaggtgttcaaattatc
aagaaggctatcactaagccagcaaagaaaattatcgaaaacgctggtgaagaaggttct
gtcatcgttggaaagattatcgatgaattcggtgacaacttcaccaagggttatgacgct
gcaaagggcgaatacaccgacatgttggttgctggtatcatcgacccatttaaggttgtc
agaagcggtattgttgatgcttcaggtgtcgcctccttgttggcaactactgaggtcgct
atcgttgatgctccaaaaccaccttctgcagctcccccagctggaatgcccggtatgcca
ggcatgatgtaa
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integrated database retrieval system
