Eremothecium cymbalariae: Ecym_3186
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Entry
Ecym_3186 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K18748
protein SSD1
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_3186
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
Ecym_3186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
OB_RNB
Motif
Other DBs
NCBI-GeneID:
11468763
NCBI-ProteinID:
XP_003645502
UniProt:
G8JRB6
LinkDB
All DBs
Position
3:complement(354713..358438)
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AA seq
1241 aa
AA seq
DB search
MGNIGNQRQEDLAANKFVATTSGRNNPKQIHIAHRKSPSELTNLMIEQFTLQRQLEIVQV
QQQQLLAHQQQLAQQAGHYLAPGMGGGAAGSPAGAGSMSFLPQPPQPQYNTNPGANGNKN
RSHSRNNSGYYNNNDFPNPASHRRTGSQSSVYGHARRHSLGLNEAKKAAAEEQAKRAGNG
SSNVSIKIDVAADISTSDSSTATAVPTSSENISTFKFPSTPLENPKGHSRATSNISPNKA
FQFPPRPFNKENQDEFTAVHNSHRRTNSRGQDPPGINSNWRAQQGLQQQSQSSSFHKQSY
SNQGFATLEPPPVFQPGHRSRGSNASTHSFSSTAGGNNSNGRKSLFAPYLPQANIPQLVE
EGRLVAGVLRVNKKNRSDAWVSTDGVLDADIFICGSKDRNRALEGDLVAVELLMVDDVWE
SKKEKEEKKRRKDASIQQDLIPLDSKDDYHNDASSSIVTASAPSSSVSQSTNTSSDKGED
NAIGNFSGAIKRRGSLKQRPTQKKNDDVEVEGQSLLLVEEEEINDEYRPLYAGHVVAVLD
RIPGQLFSGTLGLLRPSQQANNSDKPHKPKIVWFKPTDKKVPLIAIPIEQAPKDFVENAE
RYTDKMFVASIKRWPITSLHPFGTLVSQLGELNDPTAEIDAILRDNNFLSDEYLDPQNRT
KERDTFKPVELSATEIGSRPFYEGAVAISENGNISDLALHVKKLSDGRIELGCHVIDVTA
HIEEGSSLDRRARKRSSAVFMPQKTVYLLPQAMNEFLTFQPGKNSPTISVIYTLDANNFG
VISCRICEGLVLPHMVSTYDGLNKELLKAPEKRSSFINVINSIAIKFYCERLNYEDDNNS
ITLSSKLALLDTLDDEKVKVDLNMLKKTPAAAVIGEIERKVNSTVAERTYIKLGASAFLR
RQPSPISTKLQLFKKKVQKFGCNVDVTTPESLLGSILSIKDYSTRLGIELLLFKTLNRAR
YFVAGKVEPDQYGHFSLNMHLYTHFTAPLRRYADHVVHRQLKSILHGTDYKEDLDSLKIT
SEYCNFKKDCANHAQEQAIHLLLCKSINDMGNATGQLLIMATVLQVYESSFDVFIPELGI
EKRVHGDQLPLIKAEYDSNNRILDLYWQKGVDSATFVPVDEKNPKSYRSSIRNKFSSTSK
EIASVQINNKGEETSLYRGDLIAEFSKLKIEPPNLDIPSVDPSDSNPLAAYLKDVTIRRE
GENCIQEIRELEQVPILLRAEIGMALPCLTVRALNPFTSRE
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatattgggaatcaacgacaggaggatcttgcggctaataaatttgttgccact
acaagtgggaggaacaatcctaaacagattcatattgcgcatagaaaatcgccatctgag
ttgacgaatcttatgatcgaacagtttactttacaaagacagttggaaattgttcaagtg
cagcagcagcaacttttagctcaccagcaacaacttgctcagcaagcaggtcattatcta
gcgcctggaatgggcggtggggcagcaggttcgcctgcaggggctggctccatgtcgttc
cttcctcaaccgccgcagccgcagtataataccaatccaggcgcgaatgggaacaagaat
agatcgcattctcgtaataactctgggtactacaataacaacgatttcccgaaccctgcc
tcacataggagaactggctctcaatccagtgtttatgggcatgctaggaggcattcttta
ggtttaaatgaagcgaagaaggctgcagctgaagagcaggccaagagagcaggtaatgga
tcgagtaatgtttctattaagatcgatgttgctgccgacatatccacgtccgattctagt
acagctaccgcagttcccacctcgtctgaaaatatatccaccttcaagttcccgtccacc
cctctagaaaatcccaagggccattctcgtgccacctcaaacatatctcccaacaaggct
tttcagttcccacctagacccttcaacaaagagaatcaagacgaatttactgcagttcat
aactctcatcgtcgtacaaattcgaggggacaagatccgcctgggattaattctaactgg
agagcacaacaaggtttacagcaacagtcccaatcatcctcttttcacaaacagtcttat
tccaaccaggggtttgctacattggaaccaccccctgtttttcaacccggtcatagatct
cgtggatctaatgcatctactcatagtttttcttcaactgcaggaggtaacaattctaac
ggacgcaagtcgttgtttgctccctatttaccccaagcaaatatcccccagttggttgag
gaaggtaggctagtggcgggtgtgctgcgtgtcaataagaagaatagatctgatgcttgg
gtctccactgatggcgtgttggacgctgatatttttatatgtggatccaaggaccgtaac
agagctcttgaaggtgatttagtcgccgttgaactacttatggtcgatgatgtttgggag
tctaagaaggaaaaagaggagaagaagagaagaaaggatgcttctattcaacaagatttg
atacctttagactctaaggacgattaccacaacgatgcatcatctagtatcgtcactgca
agcgccccttcttctagtgtttctcaatctacgaatacctcgtctgacaagggtgaagat
aacgcaatcggaaacttttctggtgctataaagagaagaggttctttaaagcagcgccca
actcaaaagaagaatgatgacgttgaagttgaaggacaatctttattattagtcgaagag
gaagaaataaatgatgagtacagacctttatatgcaggtcacgttgtagcagttttggat
cgtattcccggtcaattgttcagtggtactttaggtttgttaaggccttcccaacaagca
aataactctgacaagcctcataaaccaaagattgtctggtttaagccaactgacaagaag
gttccattgatcgctataccaatagagcaggctccgaaggactttgtcgagaacgccgaa
aggtacactgacaagatgtttgttgcctctatcaaacgttggccaatcacatctttacat
ccttttggtactttggtatcacagttaggcgagttgaatgacccaactgctgagatcgat
gctattttaagagacaacaactttttatccgatgaatatttggacccacaaaatcgtact
aaagaaagagataccttcaagccggttgaattgtctgcaactgaaattggaagcagacca
ttttatgaaggtgctgtcgccatatcagaaaacgggaacatttcggacttggctttgcat
gtgaagaagctatctgatggaagaatagaattgggttgccatgttattgatgtgactgca
catattgaagaaggttcttcgttggacagaagagctaggaagagatcttctgctgtgttc
atgccgcagaaaaccgtttacttgctacctcaagccatgaatgaatttttaacttttcaa
cctggtaaaaactctcctacaatttcggtcatttatactttggatgcaaataattttggg
gtcatatcatgtcggatatgcgaaggtttagttctacctcatatggtatcaacttacgat
ggattgaataaagaactcttaaaggcacctgaaaaaagaagtagttttatcaatgtgatc
aactccattgccatcaagttctattgtgaaagattaaattatgaggatgataataattca
atcactttgtcttctaaattagctttactggatactttagacgatgaaaaagtcaaggtg
gatctcaatatgttaaaaaagacccctgctgctgctgttattggagaaattgaacgtaaa
gttaatagtactgtcgccgaaaggacctacatcaaacttggtgcttccgcattcttgaga
aggcaaccgtcaccgatttcaacgaagcttcagcttttcaaaaaaaaggttcaaaaattt
ggttgcaacgttgatgttactactcctgagtccctattaggctctattctatccattaaa
gattatagcactcgccttggtatcgaattgttattgtttaaaactttgaaccgtgcaaga
tattttgttgctggcaaagttgaacccgatcagtatggccatttttcattaaacatgcac
ttatatacccacttcactgctccattaaggcgttatgctgatcatgttgttcatagacag
ctgaagtcaatccttcacggcactgattacaaagaagatcttgattccttgaagatcacg
tcagaatattgcaactttaagaaggattgtgcaaatcatgctcaagagcaagccattcat
ttgttgttatgcaagtctatcaatgacatgggtaatgctacgggccagctgttaattatg
gctactgttttgcaggtgtatgaatcgtcattcgatgtttttatccctgaattaggtatt
gaaaaaagagtccatggtgaccagttaccattaataaaagctgaatatgacagcaataac
agaatattagatttgtattggcaaaagggtgttgatagtgctacctttgttccagtggat
gagaagaatccaaaatcgtacaggagttccatcagaaacaaatttagttctactagcaaa
gaaattgcgtccgtgcagatcaacaataagggtgaagaaacgagtctttacaggggtgac
ctaatagctgagttctctaaattgaaaatcgaaccacctaatttagacatcccatctgtt
gatcctagtgacagtaatccactggccgcttacttgaaggatgttactattagaagagaa
ggtgagaactgtatacaagagatacgtgaattagaacaggttcctattttattaagggct
gaaattggcatggcattgccttgtttgaccgtacgtgcattgaacccctttaccagtaga
gaatag
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integrated database retrieval system
