Eremothecium cymbalariae: Ecym_3244
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Entry
Ecym_3244 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
erc
Eremothecium cymbalariae
Pathway
erc04138
Autophagy - yeast
erc04142
Lysosome biogenesis
erc04145
Phagocytosis
erc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
Ecym_3244
04142 Lysosome biogenesis
Ecym_3244
04138 Autophagy - yeast
Ecym_3244
04148 Efferocytosis
Ecym_3244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
erc04131
]
Ecym_3244
Membrane trafficking [BR:
erc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
Ecym_3244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
Clathrin
DUF496
VPS18_solenoid_2nd
Motif
Other DBs
NCBI-GeneID:
11472170
NCBI-ProteinID:
XP_003645554
UniProt:
G8JRG8
LinkDB
All DBs
Position
3:complement(463536..466646)
Genome browser
AA seq
1036 aa
AA seq
DB search
MLKAEVVKLVSGDGKFKSLVPIGSKTILVVQQNGDFWVYSANEDEESGIQLLHKYPSLLE
EHYEVQRLKYSAQLDTVFVKCERCFVLLHACNLQQYDKIVDKRGIDKFWLLEKGLENGKE
EMTVLFYSIKGSSKFKMLTWIDGQFRSIQELTLPTKSEVLKSTSIGDTGCVIVSSTAVYL
CTYMSSELTKIEKIIKPIWSKELYDLVKELELTQTEVRVLSKSTFDDVKSILSTESPSQI
SRKTTLTSLWFKKTNGRSFKDIRFTFQPSDCCHPVVMDGKTEMLSKLDIRNNGLGYITIL
DNKRFFDRNRDFDYMQFFACRFLVINNQNTIRIVDYNQGFVFLEIFVEKEIRKVFIMSTS
FLLVWTMSNDLEMYRLSVEDSLEASFTQESKSIYEYTEANQYEALQRNITFYDSILDPGV
SLDIFGLAESDNIHECLDKYSFKLRDLNILFALKSYEKFETLLAVDAIKKPDDQFAQLPD
LLVKRIFETFIECLAPPELVIKRCLPPTISFTIDKLSTFHTSPPSNMQPELSKKLINRCC
LPYLTDIRRNLHNLQRAGPNGTISWKYRSHSIKVDLEFFQVGSTLRLDLSKLLTGIDTVL
FQIYVHYNKTLVGPLIRVQNNCDFKTVEESLKSNQMFQELIDFYYNKAEHDKALQLLTHL
SDYVDKNFTAQKVHEEIKNLVIDYLRKLPAQYLESIFEYTDWLLKHFKDKEYIISSIFMN
DTPLCGTYNYELVYNYINKYEDSLSLTYLEYIVNIYHHKDPKIFNYLIMRYIQNIDEKIY
DKKLKAILRTTSYYEPRVVLRYLSSALEGDTLNPEKVKLLKLLKIYPLRKLGEHDAALSI
LIDDLGNYPQSSSYGNELFASDKRLGRKILMSLFEKLLSKVDFNGWKNLHLFLIENGSKL
DPISLFEKLPPDIPINNLKDFLSRRIKNSSMKKNQSRIKSNLLRVNLIECTYKSSRLSSD
FVIINDDSKCYVCHKYLNIGTSEWLSLFKIGDHNVVAHYNCGRSLHGKLLTEDREFNVLP
TIKTLGEYKYSQGNIS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagccgaggttgttaagttggtatctggtgatggaaaattcaaatctttggta
ccaataggctctaaaacgatactagttgttcaacagaatggtgacttctgggtttattct
gccaatgaagatgaagagtcaggtattcaacttttacataaatatccgagtttgttggag
gaacattatgaagtccagaggttaaaatattcagctcagttggatactgtatttgtgaaa
tgcgagaggtgttttgttttgctacatgcttgtaatttgcagcaatatgataaaattgtc
gataagagaggtatcgacaagttttggttgctagaaaagggtctggagaacggtaaggag
gagatgactgtactattttactcgattaaaggttcttcaaaatttaaaatgctcacttgg
atagatggtcagtttcggtctattcaggagctgaccttgccgaccaaatcagaagttttg
aaatctacttcgattggagatacaggttgcgttatagtatcatcgacagctgtttatctt
tgtacctatatgagttcagagcttaccaaaattgagaaaattatcaaacctatatggtct
aaggagctgtatgatttggttaaagaattagaattgacccaaactgaggtcagagtccta
tccaaaagtacttttgatgatgtaaagtcgatactttctactgagagtccttctcaaatt
tctagaaaaactaccttaacgagtctatggttcaaaaagacgaatggaaggtcattcaag
gacattagatttacttttcagccatcggattgttgtcacccagttgtaatggacggaaaa
actgagatgctatccaaattagatataaggaataatggattaggttacattaccattctt
gataataaaagatttttcgatagaaacagggattttgattatatgcagttttttgcatgt
cgttttctagttataaacaaccaaaataccattcgaattgttgattataaccaaggcttc
gtttttctggaaatatttgtagaaaaagagatcaggaaggttttcataatgtcaacttcc
tttcttttggtgtggactatgtcgaatgatttagagatgtatcgattatctgtcgaggat
tctttagaggcctcatttacacaagaaagcaaatcgatttatgaatacacagaggccaat
caatatgaggcattgcagagaaatattacattttatgacagtatattagatcctggcgtc
tcattagatattttcgggttggcagagtctgataacattcatgagtgtttggataaatat
tctttcaaactgcgagacctaaatattttatttgctctaaaatcctatgagaagtttgag
acattgcttgctgttgatgcaataaaaaagcctgatgatcagttcgcacagcttccagat
ctactcgttaagcgtatttttgaaacattcattgaatgcttggctcctccagaattggtt
attaaacgctgcttaccgcccacgatctcattcacaattgataaactttctaccttccat
acgtctccacccagcaatatgcaacccgaattatccaagaaacttattaaccgttgttgt
ctaccttaccttactgatatcaggaggaatttgcataacttgcagcgggcaggtcccaat
ggcacaattagttggaaatatcgctcgcattcgattaaagtagatttggaattctttcag
gttggttcaactttgcgtcttgatctttccaaactactaacaggaattgataccgttttg
ttccagatttatgtacactataacaaaactttagtaggtcccttaatcagagtgcaaaac
aactgcgatttcaaaacagtcgaagaatcgttaaaatccaatcaaatgtttcaggaatta
attgatttctattataataaagcagagcatgataaggcattacaattattaacacattta
tctgattatgttgataaaaacttcactgcccaaaaggtgcatgaagaaatcaagaattta
gttatagattatttgcgcaaattgccagcccaatatctagaaagtatttttgaatacact
gactggttactgaagcactttaaagataaggagtatattatctccagtatatttatgaat
gatacacctttatgtggtacctataactatgagttagtgtacaactatattaacaagtac
gaagactcactgtcattgacttatttggaatacattgttaatatttaccatcataaggac
ccaaaaatcttcaactatttgattatgaggtatatacaaaatattgatgaaaaaatttat
gacaaaaagttaaaagcaatattaagaaccacttcatactatgaacctcgtgttgtatta
agatatttgtcttctgcacttgaaggtgatacgttaaacccagaaaaggtaaagcttctt
aagttattgaagatataccctctccgaaaactgggcgagcatgatgctgcattgagtata
ttaattgatgatttagggaactacccgcaatcatcatcatacggcaacgaattatttgcc
tctgataagaggcttggtcggaagattttgatgtcgttatttgaaaagttgttatcaaaa
gttgatttcaatggctggaagaatttgcacttgtttcttatcgagaatggttccaaatta
gatcctataagcttgttcgagaagttgcctccagatatcccaattaacaatctgaaagat
tttttgagccgaaggattaaaaactcttcaatgaagaagaatcagtctagaataaagagt
aatttattaagggtaaatcttatagaatgcacctacaaatcttcaaggcttagctcagat
tttgtcatcattaatgatgacagcaaatgttatgtttgccacaaatatttaaatatcggt
accagcgaatggctttctttattcaagatcggagatcacaatgttgttgcacactataac
tgcggccgttctcttcatggaaaattgttgaccgaagatcgtgaatttaacgttctgcca
actatcaaaacattgggggagtacaaatattcacaaggaaatatatcttga
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