Eremothecium cymbalariae: Ecym_3279
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Entry
Ecym_3279 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K11373
elongator complex protein 1
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erc03016
]
Ecym_3279
Transfer RNA biogenesis [BR:
erc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
Ecym_3279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
TPR_IF140-IFT172
WD40_CDC20-Fz
Ribosomal_L21e
Motif
Other DBs
NCBI-GeneID:
11468850
NCBI-ProteinID:
XP_003645589
UniProt:
G8JRK3
LinkDB
All DBs
Position
3:527297..531274
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AA seq
1325 aa
AA seq
DB search
MRNLIILNRGKLTPTSHSHPDLQLLTSSFDILSDSITCVLHALDNGVIEVQQYRKDGTVN
DLASFFVQSYNDKLLSFIHFADINQLIFVFAQGDIICATYDPTSLNPEETVVEVVGSIDN
GIMAAEWSYDEETLAILTMDRSVVLLSRQFEPIAETKLEADDLKISKHVTVGWGTKETQF
RGKGARAMEREALESLKNSGLVGNELRDPTMPFKVDSGAITEMDNKSGAISWRSDCEYFV
VSTVEVVKDAEDESKDLERRALRVYSRDGQLDSASEPVDGLEHNLAWKPQGSLIAGIQRK
IDTPNEESLDLVFFERNGLRHGEFNTRLAIDERINSLAWNASSEVLAVVLENRIQLWTTK
NYHWYLKQELYGNNIRFFKWNPEKDFTLMYGDLNDIYVVDLTYKMALGPTIKPFDRGTAL
VIDGKTVNITPFTIANVPPPVYFRDFEAPGNVIDVATSRSNELYAALVESALVLASVPSI
DAMVRGKHPVIVTTIPKHQFATELDIVRQVAFINDNFIGVLLDSDNISRIALISIADITQ
PSLLTIVDTYTKVVLLRSSFEYNSLVYETRDCKIVQLDANGITAQIAQFPQLACDFRVKR
ISLSDTAHEWHEDQSKCIAIGLTSGGKLFANTVQLSSAVLSLEITDSLLLITTAQHYLQF
VHLNTTEFQPLPPIEGDVFDERVRAIERGSLLVGVSPSKSAVVLQAPRGNLETIYPRIMV
LAVVRKNISDGAYKEAFETCRTHRINLDILHDYAPEMFFGNLEGFINQIENVDYLNLFIS
CLSDEDVTETKYKETLDSNIAASLQVAPPQLTEMELYIKKKTFDSTNSKVNKICKAMLKV
LLGNATYKEKYLQTILTSYACQNPPNLEDALTLIGELLNVEERDSAITYLCFLQDVNLVY
KIALSLYDVELSLAVAQKSQMDPREYLPFLQKLHSNETGRRKFIIDDYLSNYEKALGHLA
ELEQSKDKVSEELIEYVQTHQLHKEALNIFRYETMKQNYIYYIYAQHLTSKQEYNEAGIV
YEMLCKWSDAVAVYTLGNKWAEALSIVTTHFPKKIPEISEKLVNSLTLEHKYAAAAQIEL
KFLNNIPASVELYCKASAYDEAILLCSEKGQINLVTEVVDPALGEGFSTVAELIADCKSQ
VNSQLKRLRELRTKKEADPYAFYGQETEQADDVSIAPSETSTKESFFTRYTGKTGGTAKT
GASRRTAKNKRREERKRARGKKGTIYEEEYLVQSIGRLIERLEQTQPDAVKLIDGLLRRN
MREQAHQIQKGFMGLLAFLKDNVVEIYTISEKDRERIDEDGAVYYLPEIPIPELKGFPKR
NIIDY
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacttgataattttgaatcgaggaaagttaacgcccacttcccattcacatcct
gatttgcaactgcttacgagctcatttgacatcctttcggatagtataacatgtgtttta
catgctctagataatggtgttattgaagtgcagcaatataggaaagatgggacggtaaat
gatttagcatccttttttgtgcaatcctataacgacaagctactttcctttatacatttt
gctgacattaaccaacttatatttgtttttgcccagggtgatatcatctgcgcaacttat
gaccccacgtctttaaatccagaggaaactgttgtggaagttgtgggctctatcgataat
ggtattatggctgccgaatggtcttacgatgaagagacgctggccattttaaccatggat
cgttctgttgtgttgttgagtcggcaattcgagcccattgcggaaacaaaattggaggca
gatgatttaaagatttctaagcatgttacggttggttggggtaccaaggaaacgcagttt
agaggtaaaggtgcacgtgcaatggaaagagaagctctggagtcattaaagaattccgga
ttagttggtaacgagcttcgtgatccgacaatgccattcaaagttgattctggagctatt
acagaaatggataacaagtctggtgctatatcgtggagatccgattgtgaatattttgta
gtttctacagttgaggtagtaaaggatgctgaagacgaatctaaggatctagagagacga
gctctaagggtgtattctcgagatggacagttggatagtgcatccgagcctgttgatggc
ttggaacataatttagcttggaagccacaaggttctttaattgcaggaattcagcgtaag
atcgataccccaaatgaagaatctttggatttagtcttttttgaacgtaatggattaaga
cacggtgagtttaacacacgtttagcaatcgacgagcgtattaactctttggcttggaat
gctagctctgaagtattggcagttgttttagaaaaccgaattcaactctggacaactaaa
aattaccattggtacttaaagcaagagttatatgggaataacataaggttttttaagtgg
aatcctgaaaaggactttactttaatgtacggtgatctaaacgacatttatgttgttgat
ttaacttacaaaatggcgttgggaccaacaatcaagccttttgatagaggaacagctttg
gttattgatggaaaaactgttaacattacgccatttactatcgccaatgtcccacctcca
gtatacttcagagattttgaagcaccaggaaacgtcattgatgttgcgactagtcgttca
aatgaactttatgcagccttggtggaaagtgctttagtattggcctctgtaccatccatt
gatgctatggtcagaggaaaacacccggttattgtaactactatacccaaacatcagttt
gctacagaactcgatatagtgcgtcaagtcgcgtttattaatgataatttcattggcgtt
ttgttagactctgataatatttcaagaattgcgctaattagtattgcggatattacacag
ccttcccttttaacgatcgtagacacctacacaaaggttgttctcttaagaagttcattc
gagtataattcgctggtttatgaaactcgtgactgcaaaatagttcaattggatgcaaac
ggtatcacggcacaaattgctcaatttcctcagttagcttgcgattttcgtgttaagaga
attagtttatctgatactgctcacgaatggcatgaggatcagtcaaagtgtatcgccatt
ggattaacaagtggcgggaaactgtttgctaatactgttcagttatcatctgctgtgctc
tctttagaaataacagattcactacttttaattacaactgctcaacactatctgcaattt
gtgcacttgaacacaactgaattccagccactacctcccattgaaggtgatgtatttgat
gaaagagttcgggcgattgaacgtggttcacttttggtgggagttagtccatctaaatcg
gctgttgtattgcaagcccctcgtggtaatttagagacaatatatcctcgaattatggta
ttggcagttgttagaaagaatattagcgatggtgcttataaagaagcatttgaaacttgc
cgcacacacagaataaacttggacattttacatgattatgcccctgaaatgttttttgga
aatcttgaaggctttatcaaccagattgaaaatgttgattatctaaatctgtttatatcc
tgcttaagcgatgaagatgttacagaaacaaaatacaaagaaacgcttgattccaatatt
gctgcatctctgcaagttgcaccaccacaacttaccgagatggaattatacataaagaaa
aagacttttgattcaaccaactcaaaggtgaacaagatctgtaaagctatgttgaaggtt
ctactgggcaatgcaacatacaaagaaaagtatttacaaactattctcacttcgtatgca
tgccagaatcctcctaacctagaggatgctctgactttaattggagaactattaaatgtt
gaggaaagggactctgcaatcacttacctatgttttttgcaagatgttaatcttgtctat
aagattgcattatctttgtatgatgttgagctatcactggctgttgcacaaaagtctcaa
atggacccaagggaatatcttccgtttttgcagaaattgcattctaatgagaccggtcgt
cgtaaatttataattgatgattatttgagtaactatgaaaaagctttgggtcatctagct
gaacttgaacagtcaaaagataaagtttcggaggaattaatagaatacgttcaaacccat
caactgcataaggaagcactgaatattttccgttatgagacaatgaaacaaaactatatt
tattatatttatgcccaacatttgacgtctaaacaagaatataatgaagcaggtatagtg
tatgaaatgttgtgcaaatggagtgatgctgtggcagtatacactttgggtaataagtgg
gcggaggccctgtcaatcgtgacgacacatttcccaaagaaaatccccgaaatttctgaa
aaacttgtgaactcgctgacattagaacataaatatgctgctgctgcccaaattgaatta
aagtttctgaataacattcctgcgtcagttgagttatattgtaaagcctccgcttacgat
gaagcaatattactttgtagtgaaaaaggacaaattaatttagtcacagaagttgtagat
cctgctttaggtgaaggatttagtactgtggcagaactaatagctgattgtaaatcacaa
gtcaattctcaattgaaaagattaagggagcttcgtacaaaaaaggaagctgatccttat
gcattctatggacaagaaacagaacaagctgatgatgtttctattgcgccatcagaaaca
tctaccaaagaatccttttttactagatatacggggaagactggaggtactgcgaagact
ggagcctcgaggagaaccgccaagaataaacgccgtgaagaacgtaaacgtgcccgtggt
aagaagggaacaatatatgaagaagaatatttggttcagtctattggtagactgattgaa
cggctagaacagacacagccagatgcagtgaaattgattgatggattgttgagacgcaac
atgagagagcaagctcatcagatccaaaagggattcatgggcctacttgcattcttgaaa
gataatgttgttgaaatatataccatcagtgaaaaggatcgtgagagaatagatgaagac
ggtgcagtctactacttaccggagatcccaattccggaactcaaagggttccctaaaagg
aatattattgattactga
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