Eremothecium cymbalariae: Ecym_3422
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Entry
Ecym_3422 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
erc
Eremothecium cymbalariae
Pathway
erc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ecym_3422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_3422
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
Ecym_3422
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
PRP6_TPR
MinC_N
Motif
Other DBs
NCBI-GeneID:
11469002
NCBI-ProteinID:
XP_003645725
UniProt:
G8JRY9
LinkDB
All DBs
Position
3:complement(795701..797692)
Genome browser
AA seq
663 aa
AA seq
DB search
MSGNETPDMVKAKSGSPSSGGSSSNTLPARPTLRDRDPNDIENKLKDQIEEQPTQIPLYL
ELIRYYISKQQLSEVRNLFSQLHDLFPLESFLWTIHLNWELEQDEFTQVETLLARCLSGD
LANNDLYLWSTYLGYVRKKNNLITGGEEARATVLKAFDVVMDKCAKFEPRSTQFWQEYLH
FLEHWKPVSKWEEQQRIELIRNLYKRLLCLPVESLEKYWEKYTQWEQEVNQLTARKYIGE
LSAGYMNARSVYQEWSHLTKGLRRSLPTKLNQTTLQNLPLPGNYDTKQLQIWLRWIQWET
ENRLELPDEIYNQRIDYVYRQAIQHMCFSPEIWFNYAMYVKEGSEKLLEMAVKCNPGSTV
LMFKLAEYLELSNKLAELEECFQGCIDRVSMDLQILTDTSMDPIPIYEQTRKLTFIYCVY
MTTMKRISGLSSARKVFKKCRKLKKSLTHEIYVENAYLEFHNNSDYKTACNVLEVGLRYF
QDNGEYINKYLDFLILVRQDAQIKSLFETCIDKIYDLDQLKEIYRKVINYESKFGNLNNV
YELEKRFFEKFPQTEKIHVFTDRYQVQGENLLKQLELPYLSYEYDIPVVGHNGLKRNLKS
ADISGEQNGVLKKQRQEHNEAIPLEIIDVLKLLPKRQYFKTVVLDPHKLADFLSDKVNIP
LNE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaatgagactcccgatatggttaaagcaaagagtggatctccatcatcagga
ggtagcagtagtaacacgttacctgctcgtccaactttgagagatagggatcctaatgat
attgaaaacaaattgaaagatcaaattgaagaacaacctacacaaatccctttgtacctg
gaattaattaggtattatatatcaaagcagcagctttcagaagttagaaacttgttttct
caattgcatgatttgtttcctttggagtcattcctttggacgattcatttaaattgggaa
ttagagcaagatgaattcacccaagtggaaactttattggccaggtgcctttctggagac
ctagcaaataatgatttatacttgtggtctacatatttaggttacgttcggaagaaaaac
aatttgattactgggggtgaagaagctcgcgctactgttttaaaggcattcgacgtagta
atggataaatgtgctaaatttgaaccgcggtcgacccaattttggcaagaatacttgcac
tttttagagcattggaaaccggtaagtaaatgggaggaacaacagagaattgagttaatt
aggaacttgtacaagaggttgttgtgtttaccagtggaatcgttggaaaagtattgggaa
aaatacacacaatgggagcaagaagtaaaccaattaacggcaagaaaatatataggtgaa
ctctctgcaggatatatgaatgccagatctgtgtatcaagaatggtcacacttaactaaa
ggtttaagaagatctttgcctactaagttgaaccaaacgacattacagaacttgcctctt
cccggaaattatgatacaaagcaattacaaatatggctgagatggattcagtgggaaact
gagaataggctagagctcccagatgagatttataaccagaggatagattatgtgtacaga
caggcgattcagcatatgtgtttttctcctgaaatatggttcaattatgcaatgtacgtc
aaagagggcagcgagaaacttttagagatggcagttaaatgtaatccaggatcaactgtg
ttaatgtttaagttggcagagtacttggaattgagtaataaattagcggaactagaagaa
tgctttcaaggttgtatagatcgggtttcaatggatttacaaatactgactgacacttca
atggatcctataccaatatatgagcaaacacgaaaattaacttttatatattgcgtttac
atgaccacgatgaaaagaatatctggcctttcttctgcaagaaaagtcttcaaaaagtgt
cggaagctaaagaaaagcttgacacatgaaatttacgttgaaaatgcgtatttggaattt
cataataacagcgactataaaactgcctgcaatgtactggaagtgggtcttagatacttt
caggataacggggagtatatcaacaaatacttggatttcctaatcttagttaggcaggat
gcacagataaaatctctctttgagacttgtattgataagatatacgatttagaccagttg
aaggaaatatacaggaaagttataaactatgaatcgaaattcggtaatttgaataatgtg
tacgaattggagaagcgatttttcgaaaagtttcctcaaactgaaaagatccatgtgttt
actgatcggtatcaggttcaaggagaaaatctccttaagcaattagaacttccgtacttg
agttatgaatatgacatacctgttgtcggccataatggcctcaagagaaatctaaaaagt
gcagatatttctggagagcaaaatggtgtattgaagaaacaaaggcaagagcataatgaa
gcaattccgttagagattatagacgtgttgaaattgctgcctaaacgtcagtatttcaaa
actgttgtattggatccacataaactagcagacttccttagcgacaaagtgaatattccg
cttaatgaatag
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