Eremothecium cymbalariae: Ecym_3456
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Entry
Ecym_3456 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_3456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_3456
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Ecym_3456
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Ecym_3456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WH_Rok
Motif
Other DBs
NCBI-GeneID:
11469021
NCBI-ProteinID:
XP_003645757
UniProt:
G8JS21
LinkDB
All DBs
Position
3:complement(853907..855433)
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AA seq
508 aa
AA seq
DB search
MSQRKLLQEVDKVLKKVKEGLAEFDIIYDKFQTTESDNQSYREKLESDLKREIKKLQKHR
EQIKSWLSKDDVKEKTSLLMENRRLIENGMERFKSVEKIMKTKKFSTEALSNPDLIKDPR
ELKKRDQFLFVEDCLEELQKQLESYEAQELTEKIERHQFHISNLENILKMLQNNELEPDT
VEEYQEDIRYYVDNNDDPDFIEYETIYEDMGCEIEVDEPKEQPTPVKSKTKSERSPKKKS
SSPVLAIANTKSTISTAGSMTATSAPASQASSSSPVSAGAKNVKKDSAPQSPIGIPPPKN
LTSKISEIIENDLATKSAFQNPLFKEELVYWLQAKRPLIQPYDTMPDKMIKQLESSLLNC
PDSLDADTPHLFQHPLSLPHPTSIFFPNEPIRFVTTTLNSSGTITNDIYGKTSMAQILTK
FDLDTLFFIFYHYQGTYEQFLAARELNIRGWLFNRVNRCWFYREVEKLPPGMEQKEEVSW
RYFDYQKSWLARRCGPDFVYREEEFERL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaggaagttattgcaagaagttgacaaagtattgaaaaaggtaaaggaaggt
ttagcagaatttgatataatatatgataaattccaaactacggaatcagataatcaatct
tatcgagagaaattagagtctgatctaaaaagggagatcaagaagttacagaaacatagg
gagcaaatcaagtcgtggttaagtaaagatgacgtaaaggagaaaacatccttgctaatg
gagaatagaagattgattgaaaatggtatggaacgatttaagtctgtggagaaaattatg
aagactaagaagttttctacagaggcactaagtaatccagacttaattaaagaccctcga
gaattaaaaaaacgagaccagttcctgttcgttgaggactgtttggaggaacttcaaaaa
caacttgaatcatatgaagcgcaggaactgactgagaagattgaaaggcatcagtttcat
atttccaatttggaaaatattctgaaaatgttacagaataatgaattggaaccagatact
gttgaagagtatcaggaggatatcagatattatgtggataacaacgatgatccagatttc
attgaatatgagactatatatgaagatatgggttgtgaaattgaagttgatgaaccaaag
gaacagccgacacctgtaaagtcgaagacgaaatctgaacgttcgccaaaaaagaagagt
tcttctcccgtattggcaattgcgaacacaaaatcaactatctcaactgcaggaagcatg
acagcaaccagcgcaccagcatctcaggcctcttcctccagtccagtatccgcaggggct
aagaatgttaagaaggattctgctcctcagtctccaattggtatccctcctcccaagaat
ttaacttcgaagatctcagaaatcatagagaacgatttagcaacaaagtctgcattccaa
aacccactgtttaaagaggaactcgtatattggctacaagctaaaagaccattaattcaa
ccttatgatacaatgccagacaaaatgataaaacagttagagtcgtctttgttaaactgt
cctgactcgcttgatgcagataccccacatttattccagcacccactttccttgccacat
cctacttcaatattcttccctaatgaaccaattagatttgtaactactacactaaactct
agtggtacaataacaaacgacatatacggtaagacttcaatggcgcaaatcttgacgaaa
tttgatctagataccctattttttattttttatcattatcaagggacatatgaacaattt
ttagctgctagagagctgaatattcggggatggttattcaatagagttaaccgttgttgg
ttttatagggaagttgagaaattgcctccaggtatggaacagaaggaggaagtatcatgg
aggtattttgattatcaaaaaagttggctggctagacgctgtggaccagacttcgtttat
cgcgaagaggagttcgaacgactttaa
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