Eremothecium cymbalariae: Ecym_3516
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Entry
Ecym_3516 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_3516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
erc03041
]
Ecym_3516
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Ecym_3516
Spliceosome [BR:
erc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
Ecym_3516
Complex C
U5 SnRNP specific factors
Ecym_3516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
BRR2_plug
Helicase_PWI
Helicase_C
AAA_22
nSTAND3
DEXQc_Suv3
TDH
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
11469093
NCBI-ProteinID:
XP_003645811
UniProt:
G8JQL0
LinkDB
All DBs
Position
3:965847..972317
Genome browser
AA seq
2156 aa
AA seq
DB search
MSEEKKNEIKQKIREIYRYDGMSNKVLRADRRLQENKADPLKDAAIAQPKSMAGRISIKD
MGQITTNEDSNIAEKPMIKELPVAKVKKEAATTTATRNIGLRSVLADGIDTLKYYPSTKP
NTEVYGNILAYVSELLGNDMPHSVVVSATDLVLQVLKGDGLESEHSMTVKKQQIEEDLDM
NLGENKFHELVNLSKKLTDYHRNTEPEAGNEVAIIDDSGSEDDDDDEDNEATTNQVLEDL
GEGMNIELIDTNDQKTNDIKLGISNDIIEFHGSTKNDAVEHIPIYVIDEYYLQRKINSVL
KVSDDLVHNISEKILQLLGEEYATKDLESKLIEILKFENYELIEFIVLNRMPLFWGTKLS
RVSEKTRESVLEEMLKNGHYSLVEEYKKREVQPKRRVSDSSNEKSLKPAMKKQKNDFTSN
YLQIVDLNTLSFDPGSKLLTTTRISLPKDSFKRIKPSYEEIHIPAPLMPTDGFPLVPISQ
FPEWAQKAFPVTETKTLNRIQSEVYPVVFDTDVNILLCAPTGAGKTNVAILAILRAISKF
FNVERNKLQISKFKVVYVAPLKALVQEQVREFQRRLQQYGIRTAELTGDSNLTKQQISDT
QILVSTPEKWDVITRNESNQSFIKYVRLIIIDEIHLLHDERGPVLESIVARSFRNQDLES
IPRLLGLSATLPNFEDVAKFLRVPKEGLFYFDSSYRPCPLAQQFCGITEKSAIKKVNAMN
HICYEKILESVAEGHQVIVFVHSRKDTSRTARWIKEKLVEEENINRFIPSDPGAVQILKR
ESKNISDRHLCELVEFGIGVHHAGLMKDDRSLSEDLFADGLLKVLVSTATLAWGVNLPAH
TVIIKGTDVYSPEKGEWTHISPQDVLQMLGRAGRPRYDTNGEGIIITNQSDIQYYLAVLN
QQLPIESQFISRFVDNLNAEIVLGSVKNRLDAVDWLGYTYLYVRLLKVPDIYNVPVEKYP
EDTVLYNYRCNLAHSALTILHNNNLVVYDALSGNVRSTELGRIASRFYIKYTTISMYNES
LGEQLDQLDILNIFAKSDEFKYMSCRQEEKHEITRLLERAPIPIKENADDPLAKVNILLQ
SYISRLVLDGFALNADMVFITQNAGRLFRALFEICLRKRWPRLTKILLNICRSIDRRLWL
TNSPLRQFPRCPIEIIKKTEASSLPWIGYLYLKSPAEVAQAIRSEKFGKATYDLIQRFPK
LRMECSIQPITQSVLKFSLELIPEWIWDSKIHGHAETFILTVEDTDGEVILYTDTITIMK
DYSHTEHLIEFTIQLDLSKPVQVPPAYFISLSSEKWLHADYRIPVVLNEIHLPKKFPAPT
QLIERDLIPINEVGEDEYMNTFPFSHFNKFQTHVFHPLYNTEDNVLICACKGSGKTVMAE
LALLNHWKNGKGRAVYICPSQERIDGLLEKWKHNFSNIAGGKNINKFGAELTLNLRLLTE
SHLILSTPSQFDLISRRWKRRRNIQTLELLILDDVHMVSNGLEGAIYETIISRMLFIRGQ
LETNLRTVGLSTSLADGRNFGEWIGANKNNIFNFSYQERNSPFQIQFQSYEDSNKVSVDP
SMLKSAFELIINTPAHLNTVVFLSARKLCIDVGITFTKIANSINKSLSKMNASELDNYLI
KVKDLQLKEFLKKGIGFFYKGMYASDKNIVEELHNKRLLSVTLSSRDFHNQAPISNNVII
LSTQYYDIREHRNVNYTIIELLEMLGLSTGYSNNPGRAIILTNSKTKDYYKKFLTEPLPT
ESYMPFYLHDGFITDIATSIIESKQDCVDWITYTYFYRRIHANPSYYGVKDTSPMGISAY
FTEVVQDTLDDLLEASVIEINHSVDEDQQQEADEVISPLNGCMISSHYNISFQTMYMFMN
SLEKSTKLKSIIETLASALEFENIQFRQEEFTTLSKIHSALPFQYSAGLQQELPAFKVFV
LLQAHFSRLKLPAELEMDLNSILGKVIPLLNGIIDILSGDGRLNVTTAIDLSQMLVQGCW
DTDSPLKQIPYFDSEILQKCADHKVETVYDIMALEDEERNSIISLPAIKLNHVAEFVNSY
PNIELQYSIDKSASMIANKPKSINVTIVRDEEPESLIVISSRFPVQKLENWWIFIGEIST
KQLYAIRKVSLTKETQSYDLDVTISEVGKHRLTLWCVCDSYMDADKELSFDLDVIE
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagagaagaaaaatgagatcaagcagaagatccgagaaatatatcgttatgat
ggaatgtctaacaaagttctacgagctgatagacgattacaggaaaataaagctgaccct
ttaaaggatgcagcgatagctcaacccaagtcaatggcaggtagaatatctataaaagat
atggggcaaataacaactaatgaagattctaatattgctgagaagcccatgataaaagaa
cttcctgttgcaaaagtcaagaaagaagcagcgacaacaactgctacaagaaatatagga
ctaagaagtgttttagcggatggaattgatacattgaaatattatccaagtaccaaaccg
aatacagaagtatatggaaatattctagcatatgtttcagagctgctaggaaatgatatg
cctcattctgtggtagttagtgcaactgatcttgtactgcaagtactgaaaggagatgga
ttagaatcagaacatagtatgactgttaagaagcaacagattgaagaagatctggatatg
aaccttggggaaaataaattccatgagcttgttaacctatctaaaaagctcacagattat
catcggaacacagaaccagaggctggtaatgaagttgccattatagatgatagtggctca
gaagatgatgatgatgatgaagataatgaagcaactaccaatcaagttctggaagattta
ggtgaaggaatgaatattgaactgatcgatactaatgaccaaaaaaccaacgacattaaa
cttggaatttctaatgatattattgaatttcatggttcaacgaaaaatgacgccgtggaa
catataccgatatatgttattgatgaatattatcttcaaaggaagatcaattcggtatta
aaagtatcagatgatcttgtacataatatttcagaaaagattctacaacttttgggtgaa
gaatatgccacgaaagatttagaaagcaaactgatcgagattttgaagtttgaaaattat
gaattgatagaattcattgtgttaaataggatgccgctattttggggtaccaagctatca
cgagtttcagaaaaaacaagagagtcggtgttggaagaaatgctcaaaaatggacattat
tctttggttgaagaatataaaaagagagaagtgcaaccaaaacgccgagtaagtgatagt
agtaatgaaaaatccttaaaacctgccatgaagaaacaaaaaaatgattttacttcaaat
taccttcaaatcgttgatttgaacactttatcctttgatcctggatcaaaacttttgact
acaacacggatttctttaccaaaggattcctttaaaagaataaagccatcttatgaagag
attcatattcccgctcctttgatgccaacagatggctttccactagttccaatttctcag
tttccggaatgggcacaaaaggcattccctgttactgaaaccaagactttaaatcgcata
caatcggaggtataccctgtggtctttgatacagatgtaaatatcctgttatgtgccccg
actggtgctggtaaaacaaacgtagctattttggccattttgagagcaatttctaagttt
tttaacgtcgagagaaacaagctacaaatatctaaattcaaggttgtatatgtcgcacct
ctgaaggcattggtgcaagaacaggttcgagagtttcaaagacgattacaacagtatgga
attaggactgcagagttaaccggtgattctaatttgacaaagcagcaaatatcagacacg
cagattttggtttccaccccagaaaagtgggacgttattacgaggaatgagtctaaccaa
agctttataaagtacgtccgtcttatcattattgatgaaattcacttattgcatgatgaa
cgtggtcctgtgttagaaagtatagtggcccgttcgttcagaaatcaggatcttgaatcc
ataccacggttacttgggctatccgcaactctaccgaactttgaagacgttgcaaaattc
ttaagagttccaaaagaagggttattttactttgattcatcatataggccatgtccgctg
gctcaacaattttgcggtattactgagaagagtgctatcaagaaagttaacgccatgaat
catatctgctatgaaaagatactagaatctgttgctgaaggccatcaagttatagttttc
gttcattcacgtaaagatacttcaagaactgctcgatggataaaagaaaaactcgttgaa
gaagaaaatattaatcggtttatcccatcagatcctggagccgttcaaattctaaaacgc
gaatcaaagaatattagcgatcgccatttatgtgaattggtagagtttgggattggagtt
catcatgccgggcttatgaaagatgatagatccttatcagaggacctttttgctgatgga
ttattgaaagttcttgtatcaacagctacccttgcatggggtgttaacttacctgctcac
acagttatcattaagggaacagatgtttattctcctgaaaaaggtgaatggactcacatt
tcgccccaggatgtactacaaatgttaggtagagctggtagaccaagatatgacacaaat
ggtgagggtatcattatcactaatcagtcagatatacaatattatttggccgtgttaaac
caacaactccctattgaatcacagtttataagcagatttgttgataatttgaatgctgaa
atcgttctgggctctgtgaagaataggctcgatgctgttgattggctaggttatacttac
ttatatgtgcgtttgctaaaagttcctgatatctataatgttcctgttgaaaaataccct
gaagataccgttttgtataattatagatgcaacctagcccactctgcactcactattctt
cataacaataatttagttgtttatgatgctctttcaggtaatgttcgatcaactgaatta
ggccgaatagcttctcgtttttacatcaaatataccaccatttcgatgtataatgaaagt
ttgggagagcagcttgatcaacttgatatcttgaacatattcgctaaatctgatgaattc
aaatatatgtcttgtcggcaagaggaaaaacatgaaattacaagattacttgaaagagca
ccaattcccattaaagagaatgcagatgatccactggcaaaagtgaatattttgctacag
tcttatatttctcggttggtactagatggctttgcattaaatgcggatatggtattcatc
acgcagaatgcaggtagattatttcgagcattatttgaaatatgcttgagaaagcgttgg
ccacggcttacaaagattttgctaaatatatgcagatcaattgacagaagattgtggtta
acgaattcacctcttagacaatttccaagatgccctatagaaatcattaaaaaaactgaa
gcatcttctttgccttggattggttatctttacctaaaatctccggctgaggttgcgcaa
gctatcaggtccgaaaagtttgggaaggctacatatgatctaattcaaagattcccaaag
ctcagaatggagtgttctatacaacccataacgcagagcgtattaaagtttagtttagaa
ctgattccagagtggatttgggattctaaaattcacggacatgcagaaacatttatactt
accgttgaagataccgatggtgaagtgattctatataccgataccataactataatgaaa
gattatagtcacacagagcatctgattgagtttacaatacagcttgatctatccaagcca
gtccaagttccacctgcatattttattagtttatcttcagaaaagtggttgcatgctgat
tatagaataccagtggttttaaatgaaatacatctaccgaagaaatttcctgctcctaca
caattgatagaaagagacttaattcccattaacgaagtgggtgaggacgaatatatgaat
actttcccattttctcatttcaataaatttcaaacacatgtttttcatcccctttacaat
actgaagacaatgtcttgatctgtgcatgtaaaggatctggaaaaactgtgatggcagaa
ttagctttattgaaccattggaaaaatgggaaaggacgtgcagtttatatatgcccatct
caggaacgaattgacggattacttgagaaatggaaacataacttttcaaatatcgctggc
ggtaaaaatattaataaatttggcgctgagttaacattaaacctacgacttctcacggaa
tcacatttaattttatcaacaccttcccagtttgatttaatatcacgccgttggaaacga
aggagaaatattcagacattagaattattgatcttagatgacgttcatatggtcagtaat
ggattagagggtgctatatatgagactattatatccagaatgctctttatcaggggtcaa
ttagaaactaatttgagaactgttgggctttctacctcattggcagacggtcgtaatttc
ggagagtggataggagcgaataaaaataacatatttaatttttcttatcaggaaagaaac
agcccatttcaaattcaatttcaatcttatgaggattcaaataaagtatctgtggatcca
tcaatgctgaagtctgcctttgaacttattataaatacacccgctcatctcaatacagtt
gttttcttatccgccaggaaactttgtattgatgttggtataacgtttacgaaaattgca
aactctatcaataaatcactatcgaaaatgaatgcctctgaattagacaactatttgata
aaagttaaggatttacagttaaaagaatttttaaaaaaaggaattggctttttctacaaa
gggatgtatgcatctgacaaaaatattgttgaagagttgcacaataaaagattgctttca
gttactttaagttcaagagatttccataaccaggcacctatttcaaataatgtcataata
ttaagcacccagtattatgatatcagagaacatcgcaatgtcaattacacgataattgaa
cttttggagatgcttggtctttctaccggctacagcaacaatcctggcagagctataatt
ttgacaaattcaaaaaccaaggattattacaagaaatttttgacagaaccgctcccgaca
gaaagttacatgccattctatcttcatgatgggttcataactgatatagctacatcaatt
attgaaagcaaacaggattgtgtggattggataacatacacatatttttacaggcgtatt
catgcaaatccaagttattatggagttaaggatacttcacctatgggaatatccgcttac
tttacggaagtcgttcaagatacattggacgacttgttggaagcttctgttatcgaaatc
aatcattcagttgatgaagaccaacaacaagaagcagatgaggttatatctccattgaac
ggatgcatgatcagctcacattacaatatttcattccagaccatgtatatgttcatgaat
tctttggagaagagtactaaattaaagtccattattgaaactttagcttctgctttggaa
tttgaaaatatccaattccggcaagaggagtttaccactttatcaaagattcatagtgcc
ttaccctttcaatattctgctggtttacaacaagaattacctgccttcaaagtttttgtc
ttactgcaggctcatttttcccgcttgaagctgcccgctgaattggagatggatttaaac
agtattttaggcaaggttattcctttactgaatggaattatagacattctatcaggtgat
ggtcgtttgaacgtgacaactgcgattgatctttcccagatgttagtacaaggctgttgg
gacactgacagcccattaaaacagatcccgtattttgacagtgaaattttacagaagtgc
gctgaccacaaggtcgaaacagtatacgatataatggcattggaagatgaagaacgtaat
tctataatatctttacctgctataaagttaaatcacgtcgcagaatttgttaacagttat
ccaaatattgaattacagtattcaattgataaatctgcttctatgattgcaaacaaaccg
aaaagcataaatgttactatagtaagagatgaggagccagaatctttaatagtgatttct
agccggtttccagtccaaaaactagaaaattggtggatatttattggagaaatttctact
aaacaactgtatgcaattcgtaaagtatccttgacgaaagaaacgcagtcttatgacctt
gatgttactatttcagaggttggaaagcatagattaaccttatggtgtgtttgtgattcc
tatatggatgcagataaagagctgtcttttgacttggatgttattgagtag
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integrated database retrieval system
