Eremothecium cymbalariae: Ecym_3517
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Entry
Ecym_3517 CDS
T02237
Name
(RefSeq) Hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03022
Basal transcription factors
erc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ecym_3517
09124 Replication and repair
03420 Nucleotide excision repair
Ecym_3517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erc03021
]
Ecym_3517
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_3517
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_3517
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Ecym_3517
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ecym_3517
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Ecym_3517
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ecym_3517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
YtxC
Motif
Other DBs
NCBI-GeneID:
11472301
NCBI-ProteinID:
XP_003645812
UniProt:
G8JQL1
LinkDB
All DBs
Position
3:complement(972456..974726)
Genome browser
AA seq
756 aa
AA seq
DB search
MKFYIDDLPVIFPYPKIYPEQYQYMCDLKKTLDIGGNSILEMPSGTGKTVSLLSLTVAYQ
MHYPEHRKIVYCSRTMSEIEKALVELESLMDYRAKELEYQEEFRGLGLTSRKNLCLHPRV
SKERKGSVVDEKCRRMTNGQAKTKKEQDIEANVELCEYHENMYNYQPEEYLPLGVYSFEK
LIKYCEDKTICPYFTVRRMISMCNIIIYSYHYLLDPRIEERVSREISQNAIVIFDEAHNI
DNVCIESLSLDLTKDLLKRASRGANALGKKVDEVRKVDTMKLQQEYQDLVKGLRANDILD
PDEEPLIPTPVLSRDVLKEAVPGNIRRAEHFVSFLKRFIEYLKTRMKVLHVISETPNSFL
HHLKQLTFIERKPLRFCSERLSLLVRTLEVDEIEDFNALKDIATFATLISTYESGFLLII
EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLNFGTVVQ
KSYSMTLAEKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF
FPSYLYMESIISTWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAILMS
VARGKISEGIDFDQHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAMR
HAAQCLGRVLRGKDDYGVMVLADRRFSRKKSQLPKWILQGLSDADLNLSTDMAIANTKQF
LRTMAQASDPKDHEGVSVWNINQLLNYQEEQKKKPI
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctacatagatgaccttccagtcatctttccttatcctaaaatatatccagag
cagtaccagtatatgtgtgatcttaagaagacattggatattggcggaaatagtatactg
gagatgccttctggtactggtaaaacggtttcgttgctatcgttaacagtagcttatcaa
atgcattatcctgagcatcgaaagatagtatactgttctcgtaccatgtctgaaatagag
aaggcattagtggagctggagtcgctgatggattacagagcgaaagaactggaatatcaa
gaagaatttagagggcttggactaacaagcagaaagaatttgtgcttgcatccaagagtg
agtaaagagcgaaagggtagtgttgtggatgagaaatgtcgtcgaatgacgaatggtcaa
gctaaaactaaaaaagagcaagatattgaagccaatgtggaactttgtgagtaccatgaa
aacatgtataattaccaaccggaagaatatttgccgctgggggtatattcttttgagaag
ctcataaagtactgcgaggataagactatctgcccatattttacggttaggcggatgatt
tcaatgtgtaatatcatcatttattcataccattacttgttggatcctagaattgaggag
cgagtatctcgtgaaatttcacaaaatgcaattgtaatctttgatgaagctcacaacatt
gataatgtctgcattgaatctttatccttagatttgacgaaggatttgctgaaaagagct
tccagaggagccaacgccttgggtaagaaagtcgatgaagtgcgaaaggtggataccatg
aaacttcaacaagaatatcaggatcttgttaaaggcttgcgtgctaatgatatcctggat
ccggatgaagaacctttgataccaactccagtattatcgagggacgtattgaaagaagca
gttcctggtaatattagacgcgccgaacattttgtttcatttttaaaaaggttcattgaa
tatttgaagactagaatgaaagttctacatgtgatatcagaaacaccgaattcctttttg
catcatttgaagcaactgacatttatagagagaaaaccgttgaggttttgttctgaaaga
ctttctttacttgtcagaactttagaggttgatgagatagaagattttaatgcgttaaag
gatattgccacttttgctacgctaatttcaacatacgaaagcggatttttattaattata
gaaccttatgaaattgaaaatgctgctgttccaaacccaattatgagatttacttgtttg
gatgcgtctattgcgataaaacctgtcttcgaaaggttctcatcggtgattattacatcg
ggaaccatttcaccactagatatgtaccctaaaatgttaaattttggtacagtcgtccaa
aaatcctactcgatgacattggcagaaaagtcgttcttgcccatgattgttactaagggt
tccgatcaagttgctatttcctcaagatttgagattagaaacgatccttctatcgtacgt
aattatggttctatgctcgtagagtttgcgaagataaccccagatggaatggttgttttc
tttccatcttatttatacatggaatctattatttcaacatggcagacaatgggcatattg
gacgaagtttggaagtataagttgattttagtggaaactcctgatgcacaggaaacctct
ttagccttggaaacttatcgcaaggcttgttcaaatggccgcggtgctattttaatgtct
gtagctcgagggaaaatctctgaaggaatcgattttgatcaacattatggaaggactgta
ttgatgattggaataccatttcaatacactgaatcacgtatcttaaaggctaggttggaa
tttttaagggagaattatcaaatcagggaaaatgattttctatcctttgacgcaatgaga
catgctgcacaatgtttgggtagagtcttaagaggtaaggatgactatggtgtcatggtc
ctggcagatagaaggttttctaggaagaaatctcagttaccgaaatggatcttacagggt
ctttcagatgctgacttaaacctgtctactgatatggcaattgctaacactaagcaattt
ttgagaacaatggcgcaggcttcagatccgaaagatcacgaaggagtttctgtttggaac
attaatcaacttctaaactaccaagaggaacagaaaaaaaagccgatttaa
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integrated database retrieval system
