Eremothecium cymbalariae: Ecym_4049
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Entry
Ecym_4049 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erc03016
]
Ecym_4049
Enzymes [BR:
erc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Ecym_4049
Transfer RNA biogenesis [BR:
erc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Ecym_4049
Prokaryotic type
Ecym_4049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
11471175
NCBI-ProteinID:
XP_003645947
UniProt:
G8JSX7
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All DBs
Position
4:104243..106717
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AA seq
824 aa
AA seq
DB search
MFRFIPVTHSTADTKHPLVILLAEHGDRYFFGKVAEGAQRACVESKTKLSKLNTIFLTGE
LDWSSIGGLPGMILTISDQGKKDLELVYGSHLLSYAVSTWRYFVFRFGMNLSVTSLDNNV
VFKDENITVKAINIGKPDTKKTLPFSDAMLSDLRSLVSKMFPLDSQNTNGDPPTGSSLDI
NLPVELISQISTSYEITFNPVRGRFNLDSAIKLGIPKGPMFSILAGGKPVTLPDGTVISP
DQVLSEQRKFPKVLILDIPNDSYLKPFFERFKDYDTKTLGSVYYFLGNNITLNSTLIKFM
EIFNDDHVHHFVSHEKVSPNSISFWSSTVTMLKLKALQQGNYNIPSTDGELSKGFYDCFN
LPLPNHRQVQESSNTALNSKLDNKRVHVYKKEDTLTIEPYTPSKESIKQRVESTADVYAS
WEQAFKKRIKPLNIAGVNLKSLITDQINVDNFNTEGKRNQVEIVTLGTGSALPSKYRNVI
STVIKVPYRANGRFHNRIIILDAGENTLGSIHRLINKAKIPEFFHNLKMIYLSHLHADHH
LGIVSLINEWYAFNKGIPNSKLYLVSPWKYETFITEWFTLENKEILERIRYIGCQNFLNS
SMNRDDNASTNSTSNSPSETKNQVCANDEQAMVSSGNFEKRRRLDDFTPQESESAIIQQM
KQELCIMSFRTCKAIHCEWSYSNSITFYMQSDSRKLFKVSYSGDTRPNVYKFANGIGKNS
DLLIHEATLDNELVADAKKKRHSTINEAILVSNAMNAKKVLLTHFSQRYPKAPQMSGSMK
VAAEAICYAFDGMIVSYDKLGEQYSNVRMLKHIFSEEEKLESEG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgattcatcccagtcacccactcaacagctgatactaaacacccattagttata
cttctagcagagcatggagatcgttatttttttggcaaggtcgctgaaggtgcacagcgg
gcgtgtgtcgagtccaagactaagctatcgaagttgaacactatctttttaactggtgaa
ttggattggtctagcataggtggattaccgggtatgattttaactatatcagatcaagga
aagaaggacttagagcttgtgtacggatcacatttactaagctatgcagttagtacttgg
agatattttgtattcaggtttggtatgaatttgagcgtcacgagccttgataataatgtg
gttttcaaggacgaaaacataaccgtcaaagccatcaatattggtaaaccagataccaaa
aagactcttccatttagtgatgccatgctttcagacttgaggagtttagtatccaagatg
ttcccattagattcccaaaatactaatggcgatccacctactggtagtagtttagatatt
aacctaccagtagaattgatttcccagatttctacctcctacgagattacatttaatccg
gtaagaggtagattcaatttggattctgcaattaaattgggaattcccaaaggccctatg
ttttctatcttggctgggggcaaacctgttacattaccagacggaactgtaatatcacca
gatcaggttctatcagaacagaggaaatttccgaaagttttaattttggatattccaaac
gatagttatttgaaacccttttttgagagattcaaggattatgataccaaaaccctaggt
tcagtttactatttcttaggtaataatataaccttaaattcaactttaatcaaattcatg
gagatttttaacgatgaccatgtacatcattttgtctctcacgagaaagtgtctccaaat
tctatttcattctggagctctactgtgacaatgttaaaactgaaggctctacagcaggga
aattataatattccttcgactgatggcgagctttcaaagggtttttatgactgctttaat
ttgcctctaccaaaccatagacaggttcaggaaagctctaatacagcactaaattctaaa
cttgacaacaaacgagtacatgtttacaaaaaagaggatacacttactatcgagccatat
acaccctcgaaggagtcaattaagcaacgcgttgaaagtactgcagatgtttatgcatcg
tgggaacaggcttttaaaaaaagaatcaaaccattaaatatagctggagttaatttgaaa
agcctaattactgatcaaataaatgtcgataattttaacactgaaggaaagagaaatcaa
gttgaaatcgttactttaggtacaggaagcgctcttccatcgaaatacaggaatgttatt
tctactgttatcaaggtgccctacagagcaaacggtagattccataatcggattataata
ttggatgctggagaaaacacgttgggatctattcaccgtttgattaacaaagctaaaata
ccagaattcttccataatttaaaaatgatatacttaagccatttacatgcagaccaccat
ttgggtattgtgtctctgataaacgaatggtatgcatttaacaaaggtattccaaattca
aagttatatttggtttcaccatggaagtatgagacatttattacggagtggttcacactg
gaaaacaaagaaatcttggaacgaattagatatatcggttgtcaaaacttccttaatagc
tccatgaatagagatgataatgcatccaccaatagcacttcaaattcaccttctgaaacg
aagaatcaagtctgtgctaatgatgaacaagctatggttagctcagggaattttgagaaa
aggcggcgtttggatgattttactccacaggaatctgaatcggcaattattcagcagatg
aaacaggagttgtgcattatgtcttttcgaacatgcaaagcaatacattgtgaatggtct
tattccaattcaatcacattctatatgcaatcagattccaggaagttattcaaagtttct
tattcaggcgataccagaccaaacgtttataaatttgccaatggaattggtaaaaattcc
gatctgttaattcacgaagcaactcttgataatgagttggtagcagatgcaaagaagaaa
agacacagtaccattaacgaagcgatactcgtttcaaatgcaatgaacgccaaaaaggtg
ctattaactcatttttctcaaagatatcccaaggcacctcaaatgtcgggtagcatgaaa
gttgcagctgaagcaatctgttatgcattcgacggtatgattgttagttatgacaagtta
ggcgaacaatattctaatgttagaatgttgaaacatattttttctgaggaggaaaaactt
gaatctgaaggataa
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