Eremothecium cymbalariae: Ecym_4115
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Entry
Ecym_4115 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
erc
Eremothecium cymbalariae
Pathway
erc03022
Basal transcription factors
erc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ecym_4115
09124 Replication and repair
03420 Nucleotide excision repair
Ecym_4115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erc03021
]
Ecym_4115
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_4115
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Ecym_4115
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Ecym_4115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4_2
zf-C3HC4
zf-RING_2
FliS
zf-RING_5
zf-RING_16
zf-RING_UBOX
TRAF3_RING
zf-C3HC4_3
3H
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
11469320
NCBI-ProteinID:
XP_003646011
UniProt:
G8JT41
LinkDB
All DBs
Position
4:239436..240404
Genome browser
AA seq
322 aa
AA seq
DB search
MDDDEKKDMCPICKTDRYLSPDMKFLVNPECYHKICESCVDRIFSLGPAQCPYEGCDKIL
RKNKFKTQIFDDVDVEKEVDIRKRVFNVFSKNLEDFDGDLDAFNKYLEEVEDIIYNLDNG
VDVAKNEEKLRTYEELNKQLIMANMERNKQFLENFEQRKKFEKEMKLKKRMLERQIEEEE
RANKEWAKREIVNQLSSNIDADEVIENVRKTVKLKKSSARRKLQELNKVLRNNPYMQMSN
GTMKKQEKVPFTPFNGDRDLLKRFTLEEDKYEDPYIKDLQTRKAYIASGFRPDYVYNRVL
TEAFMGLGCIIQEEFSVESQPS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatgagaagaaggacatgtgtccaatttgtaagacggatcgatatttgtca
ccagatatgaaatttttggtgaatccggagtgttatcacaagatttgtgaatcctgtgtg
gaccgtatattcagtttaggtcctgcccaatgtccatatgagggctgtgataagatatta
aggaagaacaaattcaagacccaaatatttgatgatgttgatgtagagaaggaggtagat
atacgaaaaagggttttcaatgtgtttagtaagaatttagaagactttgatggagacttg
gatgctttcaataagtacttggaggaggttgaggatataatatacaatcttgataatggg
gtggatgtagccaagaatgaagagaagcttcgtacgtatgaagagttgaataagcagttg
attatggccaatatggaaaggaacaagcagtttttagagaactttgagcaacgaaagaaa
ttcgaaaaggagatgaagttaaagaagcgtatgttagaaagacagatagaagaagaggaa
cgtgctaataaggaatgggccaagcgggagattgtaaaccaattatcttcgaatattgat
gctgatgaggtgattgagaacgtaagaaagactgtaaagttgaagaaatcatctgcaagg
aggaaattacaagaattaaacaaggtcctaaggaataatccttacatgcagatgtcaaat
ggcactatgaaaaagcaagagaaggttccttttactcccttcaatggagacagggatttg
ctaaagcggtttaccttagaggaagataagtatgaggatccgtatattaaagatctacag
actagaaaagcgtacattgcatccggatttaggcctgattatgtttacaatcgtgtgttg
actgaggccttcatggggttaggctgcatcatacaagaggaatttagtgtggaatcacag
ccctcttaa
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