| Entry |
|
|---|
| Name |
(RefSeq) hypothetical protein
|
|---|
| KO |
| K14400 | pre-mRNA cleavage complex 2 protein Pcf11 |
|
|---|
| Organism |
erc Eremothecium cymbalariae
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:erc00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ecym_4124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:erc03021]
Ecym_4124
03019 Messenger RNA biogenesis [BR:erc03019]
Ecym_4124
Transcription machinery [BR:erc03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Ecym_4124
Messenger RNA biogenesis [BR:erc03019]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Ecym_4124
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
4:252476..254239
|
|---|
| AA seq |
587 aa
MEDDDKVLKDFVSILDDLTFNSKHIVTSLTKMAEENISYAQQFVDAVEARITKCVPKQKL
YAFYALDSICKNAGSPYTIYFGRNLAKLYKQTYLIVDNATRTELITLFKTWMMLLPTGEL
LFDKDSLERIEQFLIKASSLHQRQAQAMAPPPTVPLLLKEIDKLSILTKERLTKKPDDSK
LQTKTILLQQLKQELQREKLPLQALHDFQQQLRHIFAQEQQVWQQQQKEQQQQYLAQQQQ
VQQQLSESGGAPPSLTHPYEESSLFGNATLSMSFLDSISSPNTSPLAPSTNKVSKVEVLY
RNLKHKNLLFEPAKESIVTLASKLEKTINPNKVRLPPFCILQDILGDVRSYYATRNVDIL
NTPNLQLSQQFVIQKNNPLTEQLIHVLYRAKPNKCTTCGVRFGSSAKERQLEVEHFDWHF
RINKRIKGTQNANAIIAKNIQSRSWYLNYEQWIQFKDEDIVSTNVDATAVNNMALALNQA
TTTTDSDNKAKNELQIRKKYIIVPDGAPDMSFQCPICTEVASAVYDEDLAEWVWRNCIDS
NGKYFHATCFYEASNNHTSKDNGSTGIDSDLERLKGLINGNSTKLSE |
|---|
| NT seq |
1764 nt +upstreamnt +downstreamnt
atggaagatgacgataaagttttgaaggactttgtaagcatattagacgatcttacgttt
aactcaaaacatatcgttactagtcttaccaaaatggcggaagagaatatatcttatgct
cagcagtttgtggatgcagtagaagctagaattactaaatgtgtgcctaaacagaagctg
tacgcattttatgcattggattcaatttgtaagaacgcaggatctccgtatacaatatat
tttggcagaaacttagccaagctatacaagcagacatatttgatagtggataatgcgaca
aggacagagttaataacgcttttcaagacttggatgatgctgctaccaacaggggagctt
ctttttgataaggattcgttagaaaggattgagcagtttctgattaaggcgagctctcta
caccagagacaggcgcaagcgatggcaccaccaccaacggttccgttattattgaaagaa
atagataaactaagtattctcacaaaagagcgattaaccaagaaacccgatgattcgaaa
ctgcagacaaaaaccattctcctccagcaactgaaacaagaattacaaagagaaaagctt
ccattgcaagcgctgcatgacttccaacagcaactacggcatatattcgctcaggaacag
caggtctggcagcagcagcagaaagagcagcagcagcagtatctggcacaacagcaacaa
gtacagcaacagctatcagaaagtggcggtgctcctccgtcacttacgcatccatacgaa
gaatcttccctttttggtaacgctacactttcaatgtcattccttgatagtatttcatcc
cccaatacgtcgccattggccccatcaacgaataaggtttcaaaggttgaggtgttatat
aggaatttgaagcataaaaatttgttgtttgaacccgcaaaagagtcgatagtcacgctt
gcctcaaagttagaaaaaacgattaatccaaacaaagtcagattacctccattctgtatt
cttcaggatatcctcggtgatgtgagatcttactatgccacaagaaacgtggatattttg
aacacaccaaatttacaactctcccagcaattcgtgattcagaagaacaatccgttgact
gaacaattaattcatgtcttataccgtgcaaaaccaaataaatgcactacttgtggtgtt
agatttgggagtagcgccaaagaacgtcagttagaggttgaacattttgactggcatttc
cgtattaataaaagaataaaaggtacccaaaatgctaatgcgataatagcgaagaatatt
caatctagatcgtggtacctaaattatgaacaatggatccagtttaaggatgaagatatt
gtttctacaaatgttgatgcaacagcggttaacaatatggcattggcattgaatcaggcc
acaacaactacggattcagataataaagccaaaaatgaactccagattcgcaaaaaatac
atcattgttccagacggtgcgcctgatatgtcttttcaatgccctatttgtactgaagta
gcatctgctgtatacgatgaagatttggccgaatgggtttggaggaattgtatcgattct
aatggaaagtactttcacgcaacatgtttctatgaagcctccaacaatcatacttctaag
gacaatggttcaacgggcatcgattctgatttggaaaggttaaagggtttgataaatggt
aatagtaccaaactgagcgagtaa |
|---|
