KEGG   Eremothecium cymbalariae: Ecym_4134
Entry
Ecym_4134         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
erc  Eremothecium cymbalariae
Pathway
erc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Ecym_4134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:erc03009]
    Ecym_4134
Ribosome biogenesis [BR:erc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    Ecym_4134
SSDB
Motif
Pfam: WD40 WD40_Prp19 Utp13 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_Nup120_160 WD40_like Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st WDR54 PAN2_N Beta-prop_VPS8 Beta-prop_NOL10_N CPSF_A Utp12
Other DBs
NCBI-GeneID: 11472425
NCBI-ProteinID: XP_003646030
UniProt: G8JT60
LinkDB
Position
4:complement(280146..282578)
AA seq 810 aa
MDFKTTFFNTTLAPFYAGSGTAVSITNDGSLLATSVLDVINIVQLKERHEIVHKINNDDE
QEITALKLTPDGSYLCFVAQNQLLRIYSLASKKIVRSMKVSSPVYVMDCDETSTLLVIGG
TDGSVSIFDIENGYVTHSFKGHGGIISSVKFYGELDGANWLLASGDTNGVVKIWDLVKRR
CMHTIQEHTAAVRGLDFCVKDSEMLLISGGRDEIINLHHFDYKKTCKLLKTLPVKQQIEA
CGFIANHESLIYHAGDNAVYQIVCLQSGKQIKSSQKPQEELFIIGVLSIENGSKHYLVLS
DQTLFLLDIEQALMEEDTTIPIKSKIAGNHGTIADMKFVGPNLDMLALATNSPTLRIIKA
PQASEEDGQFPVETNMYGGHVDLLNALDASEDGLWIATASKDHTVLLWRYSEQLGDFKQY
AKFIGHAGSVTAVALPNIMDQHFPNFLLSSSTDMTVKKWKVPKPTQNPTEDEIPVVKTSE
YTRRAHEKDINALSISPNDSIFATASYDKTCKIWDLVTGELVATLANHKRGLWDVSFCQH
DKLIATCSGDKTIKIWSLENYNIKATLEGHTNAVQRISFINKNKQLVSCGADGLVKIWDC
STGECLRTLDAHDNRIWALEVADDGDRFVTADADGLFQFWKDNSEEEHEQDLEKKRLKVE
QEQSLQNYLSKGDWVNAFLLAMTLDHPMRLYNVLKSSISGRDETKESDDNHVFSAELDHI
IGTLDDEQLLRLLKRCRDWNTNAKTYTVAQLVIKCIMREHNIVQLSEIPGVVQVIDALIP
YTERHYSRVDSLVEQSYILDYALMEMDKIL
NT seq 2433 nt   +upstreamnt  +downstreamnt
atggattttaaaacaacattttttaatacaacacttgccccattctatgcaggtagcggc
acggctgtctccattaccaacgatggttcattattggctacatcagttttagatgtgatc
aatattgttcaacttaaagaacgtcatgaaattgtgcataagattaataatgacgatgaa
caggagataactgccttaaaattgactccagatggttcatatttatgttttgttgcccag
aatcaattgttgagaatttacagtttggcttcgaaaaaaattgttaggtctatgaaagta
tcttctccagtatatgtcatggattgtgatgaaacatcaacacttttagtaatcggtggt
actgacggcagtgttagtattttcgatattgaaaatgggtacgttactcattcttttaaa
gggcatggtggaattatctctagtgtgaagttttatggtgaattggacggtgcaaattgg
ttgcttgcttcaggtgataccaacggtgtagtaaaaatctgggacttggtaaagcggaga
tgtatgcatacaatccaagaacatacggctgcagtgagaggtttggatttctgtgtgaag
gattcagaaatgctactaatatctggtggtagagatgaaattatcaacttacaccacttt
gattataagaaaacttgtaaactattaaaaaccctacctgttaagcagcagatcgaggca
tgtgggttcatcgctaaccatgaaagtctaatatatcatgcgggtgacaatgcagtatat
caaattgtttgcttgcagtctggaaaacaaataaagagttcacagaaaccccaagaggaa
ttgtttattattggtgtcttgtcaattgaaaatggttcaaagcattatttagtgttatca
gatcaaaccttatttttgttagatatcgaacaggcattgatggaagaagatacaaccatt
ccaattaaatctaaaatcgctggtaaccatggaactatagccgatatgaaattcgtaggt
cccaatttagatatgctggctctagcgacgaattcgcccacattgagaataatcaaagct
ccacaagcctctgaagaagatggtcaattcccggttgagacaaacatgtatggggggcat
gttgatttactaaatgctttagacgcttccgaagatggtttatggattgcaaccgcgtcg
aaggatcacactgtcctgttatggagatatagtgaacaactcggtgacttcaagcaatat
gcaaaatttatcggacacgcaggttcagttacagctgttgccttacctaatatcatggat
caacattttcctaactttttgctcagttcctctacagatatgactgttaaaaagtggaaa
gttccaaaaccaacccaaaatccaacagaagatgaaataccagtggtcaaaacaagtgag
tatactaggagggcacacgaaaaagatataaatgcattaagtatctctccaaacgattcc
atatttgcgaccgcttcctacgacaaaacttgcaaaatttgggatctagttactggagaa
ttagtggctacgttggcaaatcacaaacgtggtttgtgggatgtttcattctgtcagcat
gacaagctaattgcaacttgttccggcgataagactattaaaatttggtccttagaaaat
tataacattaaagcaacgttagaaggccataccaacgctgtacagcgtatttcattcatc
aataagaacaaacagcttgttagttgtggtgcagatgggctagtgaaaatctgggactgt
agcactggtgaatgtcttagaactttagacgctcatgataatagaatatgggcattggag
gttgcagatgatggtgacaggtttgtgacagcagatgcggatggtctgttccaattttgg
aaggataatagtgaagaagagcatgaacaggatttggaaaagaagagactaaaagttgag
caagaacaatcattacaaaattatttatccaaaggagattgggtaaatgcattcttgttg
gcaatgaccttggatcatcccatgcgactatataatgtattaaaaagtagcatctctggt
agagatgagactaaagaaagtgatgataatcacgtctttagcgcagaattagaccacatc
attggcaccttggatgacgagcaacttttaaggctgctcaagaggtgcagagattggaat
acaaatgcaaaaacctacacagttgctcagttggtaatcaagtgtattatgagagagcat
aatatcgttcaactgagtgagattcccggcgtagttcaagtaatcgatgccctgatcccg
tacaccgaaagacattattctagagttgattcattggtagaacagagttatatcttggat
tatgctctaatggagatggataaaatactgtaa

DBGET integrated database retrieval system