Eremothecium cymbalariae: Ecym_4164
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Entry
Ecym_4164 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K15543
RNA end formation protein 2
Organism
erc
Eremothecium cymbalariae
Pathway
erc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ecym_4164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4164
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Ecym_4164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPV_P10
RB_A
Motif
Other DBs
NCBI-GeneID:
11472433
NCBI-ProteinID:
XP_003646058
UniProt:
G8JT88
LinkDB
All DBs
Position
4:complement(348576..350069)
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AA seq
497 aa
AA seq
DB search
MYKHNDEKQEEDSKRTLRAMNSIPEKINIAHAMPSSMITVMRDDIKHFQQQVRELDQKQM
DKVDHYIDQLDSIFTQFCKDNEHVEKKARGVTEADIQLFQGLKRMYADYMNQLSEIKKKK
VEEEQECHADKPLEYILDELPYLQPSERNRYISALLKDRVPFSKDMKLFEGIANLCLLDG
SVKDYLQTYKCLLQSVGFTQEEILSRIPFLANDYEPTEAVKREVTPDTPLSSDTVSQDAS
NDSTNTNNTTSTAISLLSNTSTSESNDRPEEDKKKKISFSKYLKKDVSEPVKRSLSPDEN
AQPIVKKQKFESPVSILRDGKKTKKRSVIRFVDDCKLVTVFGDDLPDSGVITSPDRLKKI
LNPYVEGEPREFLLENWRTQKVHKLIIDVGIIEDSDISEFRNGPIATSTKVPTAYRLNFT
KFNEDLANFHKEPVDNEEEEQELKNHKGKRRGGKGPIIVRAFGKNALLLKKERGGLPYKK
VPEVRRNDYPSRPDDDM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtataaacacaacgacgagaaacaagaagaagattccaaaagaacactcagggccatg
aactccatccctgagaaaataaatatcgcgcatgctatgccctcctctatgattactgtc
atgagagatgatattaaacatttccaacaacaagttagggaattggatcaaaagcagatg
gataaggtagatcattatatagaccagttagactctatctttacccagttttgtaaagac
aacgaacatgttgagaaaaaagctagaggtgtaactgaagcagatattcagctttttcaa
ggcctaaaaaggatgtatgctgattatatgaatcagttgagtgagataaagaagaagaag
gttgaagaggaacaagaatgtcatgcggataaaccgctggagtatattctagatgagtta
ccttatttgcaaccttcagaacgtaataggtatattagtgcattgctcaaggatagggtt
ccgttttctaaggatatgaagttgtttgaaggcattgcgaacttgtgcttgctagatgga
tctgtgaaggattatctacagacatacaaatgcttgttgcagagtgtggggttcacacaa
gaagaaatattaagtagaattccatttcttgcaaatgactatgagccaaccgaggcagtg
aagcgagaggttacgcctgatacgccattgtcgtcggacactgtctctcaggatgcaagt
aatgactcaacgaacactaataatactacatcaactgctatttcattgctatctaatact
tctacttctgagtctaacgacagaccagaggaggataaaaagaaaaagatttcattttca
aagtatttaaaaaaggacgtttcagagccagttaagaggtcactgtctccagatgagaat
gcacaacctattgtgaaaaaacagaaatttgaatcgccggtatctattttgagagatggg
aaaaagacgaagaaacgttctgtgattagattcgtggatgactgcaaacttgtaactgta
tttggtgacgatttacctgattcaggtgtaataacctctccagatagactaaagaaaatt
ctaaatccatatgtagagggggaaccaagggaattccttcttgaaaactggaggactcaa
aaagtgcataaattgataatagatgtcggaattatcgaagattccgatatttctgagttt
aggaacgggcctattgcaacaagcacaaaggttccaacagcttacaggctcaatttcact
aagtttaacgaggatttggcaaactttcacaaagaacctgtagataatgaagaagaagaa
caagaactgaaaaaccataaaggtaaaagaagaggcggtaaaggaccaattatcgtgcgt
gcatttggtaaaaatgctctcttgttaaaaaaagagagaggcggtcttccgtataaaaag
gtgccagaagtccgcagaaatgactacccctctagaccagatgacgacatgtag
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