Eremothecium cymbalariae: Ecym_4169
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Entry
Ecym_4169 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4169
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Ecym_4169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH_2
DUF4200
Motif
Other DBs
NCBI-GeneID:
11469384
NCBI-ProteinID:
XP_003646063
UniProt:
G8JT93
LinkDB
All DBs
Position
4:359440..361047
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AA seq
535 aa
AA seq
DB search
MSYNRNQQPCKYFQQGRCNKGKACNFAHVYSNNQNNSSQTAMGKSEAERYKDLVNDSSLD
KWSNLVTNDMIDVNSFRIKPLMSSYSVSDVAAVNLIQGRDYSAEESRFQHWMAKQQNNLS
HYEAELNARDEDMKKCIKFVKDNAKKGSRFLQLATRRLKEQGSYPTKGFIEHPLDLTGKS
YGITSNTFQAANTFGAFGGTPSPSPFGQLSTATGNLSASIGTTGGSFGQPSFGQTSLPAT
GGVFGQPSFGSSNVMAGATGGVGLGSSEVSSAFGKPAFGNQTTSGVIASANNRFSSSKPN
AFGQPTFGSSGFGATTKPASTFGPINTTSSPFGSFSNNSSTSPFGQFSNNSSTSPFGQFS
NTTAASVTSPFGSSATQFRHGAIPNSTNVSSAGINQNNSGSPFGTNQANPFQNQTTGVQS
PFNQPTSFSAGNAFGFGQNGMTSNLFNKTSGANLPASHFEQKPPDPFNGIKNVFNSSSNQ
PVSTSSATSFVQGLPTADDKITEDDLPTEILNEFRADKFTLRNVPDAPPPLTLVS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaatagaaatcagcagccttgcaaatatttccagcagggaagatgtaacaaa
gggaaggcatgcaactttgcacatgtatattcaaataaccaaaataattcatcacagaca
gcaatggggaaatcagaggctgagcgatataaagatttagttaatgattcttctttggat
aagtggtcaaacttggtgacgaacgacatgatcgatgtaaactcgtttcgcataaagccc
ttgatgtcaagttatagtgtctcagatgtcgctgcggtaaacttaatccaaggtagagac
tattctgctgaagaaagtaggtttcaacactggatggctaagcagcagaataatttatca
cattatgaagctgaacttaacgcgagggatgaagatatgaagaagtgtataaaatttgtg
aaagataatgccaaaaagggttcacggtttttacaattagccactaggcgtctaaaagaa
caaggttcttatcctacaaaaggttttatagagcacccattagacttaacaggaaaatct
tatggcataacaagcaatacttttcaggcggcaaatacctttggggcttttggtggcact
cctagtccgagtccgtttggacaattatcaacagctactggcaatctatcagcaagcata
ggtactactggtggatcatttggacagccttcttttggtcaaacctcgctgccagctacc
gggggtgtctttggtcaaccttcttttggtagcagcaacgttatggctggagctactgga
ggtgtaggccttggatcatctgaggtgtcaagcgcgtttgggaaaccagctttcggcaac
caaactacttcaggggtgattgcttcagcaaacaatagattcagcagtagtaaaccgaat
gcttttggccaaccaacttttggctcaagcggttttggagccaccaccaagcctgcatct
acttttggtcctataaatacgacaagttcaccttttggctccttcagcaataattccagc
acttcaccttttggacaattcagcaataattccagcacttcaccttttggacaattcagc
aatacaacagctgcatccgttacatctccatttggcagttctgcaacccaatttagacat
ggtgctataccgaattcaacaaatgtgtcgtcagccggtattaatcagaataattctggt
agtccatttggaacaaaccaggctaatccatttcaaaatcagactactggtgtccagtcg
ccgtttaaccaaccaacttcgttttccgctgggaatgcttttggatttggccaaaatggc
atgaccagcaatctgttcaataaaacttctggagctaatcttccagcttcccactttgaa
caaaagcccccagatcctttcaatggcattaaaaatgttttcaattcatcttccaatcaa
ccggtttctacctcttctgcaacttcatttgttcaaggtttgccaacagcagatgataaa
ataacagaagatgatctacccactgaaattttaaacgagttcagggctgacaagttcaca
ctcaggaatgttccagatgcacctcctccgcttactttggttagctga
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integrated database retrieval system