Eremothecium cymbalariae: Ecym_4232
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Entry
Ecym_4232 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K23719
nuclear mRNA export protein SAC3
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4232
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
Ecym_4232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAC3_GANP
SAC3
KIP1
Motif
Other DBs
NCBI-GeneID:
11469414
NCBI-ProteinID:
XP_003646116
UniProt:
G8JTE6
LinkDB
All DBs
Position
4:complement(484651..488781)
Genome browser
AA seq
1376 aa
AA seq
DB search
MASVGSLNPLANAFKKKSFKNTGRNIKNRTQNRLKVNNGDDNREQHVDSQSQKQGEHLYV
TKHKRLIIPKISQEDDCKIGPLLNGADPGSMGFQSNTRHKNRELPRYLLHQAPILHSKSF
TPDAWDVANQKKMLSLENAISDVSELWETLKKIRDVERKIMEQKGLVDRADSAKDLNDAI
VFQGTCPDMCPIFERARRSVENNVVRYEKEHPDDKKISRVKALKVFSRPAAAAVPPLPSD
VRPPHVLVKTLDYIVENIIQHLPECESFLWDRMRSIRQDFTYQNYCGPEAVDCNERIVRI
HLLILHVMVKADVEYIRQQELEQLHKALITLSEIYEEVRQQGGSCPNEAEFRAYALLSKI
RDPEYDRVIQGLPSEIFHNDLVQLAICFRRVISNTSYMERGHIKTENSLNLYLRFFQLIK
SGQVPFLMCSFLEVYVNEVRFSAMKALSLTISKRQKNIPFNYFIESLLFNNVDELLSFCR
YYSIDTDDSGVSLKSLKHHSHLIPETKPLKQSYLTSVEEKLKSVSLVTLINSGKPNVGIL
SENSNALLTKAVKIEVTPEPIQVSSEAKTEDIVAGSQLASSSLLPLPGIDEQHVSDPQPT
RHTFQLMQNANDGSERLEHFTSNPLDSSTVPHEGRSSNTPFTGIQPFTASFPFSADNHTP
QKSLEETIKTNKTRPSAQEQYQEKHEQNTEDKNLASNRNSDETEHVIFEELEQLKEQKEI
RNEYVVKQLSDALIGDVVGTKLSSLIKDEFRRKEQKRLQIKTLSEALFNAFIHETLYFIY
AESKSDLFYERHVLRKVFKKWFTKYQSSKLERESRLKHKEELQQVGKQLGIPFLKRPRTS
DSHNSSTSIIQANSSFMKTPKAWVYTPVATETNHFSTPVRRNSALWLPIDLKEEYCNRIS
VSEELIAHSDLASNADHKQDSVGLYVYSKNWNSISGSWLLSKFSLNDRTSFVSSNRAVKL
SVIKLSNDYNPSKFSTLQLLVFNTGVTDSDIFDLEMKMKQDGEKLIELVHGIALNTNYRF
SLLIVFWVSAENPWDDNVIAKYLKLNTIARLFGTIIQSIELCKMNNDRPDEILLRGLVKI
AENFRFELTERGAYNRSIMRRNLAGAGGFSHMNLTEPLSDLDEKLHKMIELEKRKHDAYK
NRKSLYAHLQNHINASPKLKKTKLPVLLSENHKNRSKTPQRILPHWRSLSESPGSSLTSI
SSHLAGKVKHLPPSIPTYGTPSQLAPSPSSGDNKLIFQTPSAAILGGSSTSIPIAGTANT
SGLSNITIAPPLMTPITQTVLETPPPKERQNYVNNNYDPNVGTDSFINKNQSESAGVTPG
SMVLREAPKIIRCGFRIMSQTSEPPQESSPDNREQVPDSVLELKDLIASVKSKLKK
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagttggttccctgaatccgctagccaatgcttttaaaaagaaatcgttcaag
aatacgggaagaaacattaagaacaggactcaaaatagactgaaggtaaacaacggtgat
gataacagggaacagcatgtagattcacaatcacaaaaacaaggtgaacatctatacgtt
acgaaacataaaaggctaatcattccgaaaatatcgcaagaagatgattgtaagataggg
cctttattgaatggggcagatcctggaagtatgggattccagagcaacacaaggcacaaa
aaccgagaattgcctcgatatctactgcaccaagcaccaatactacatagtaagtcattt
acgccggatgcttgggatgtagctaatcagaagaagatgctgagtcttgagaatgcaatc
tcagacgtttcagagctttgggaaacattaaagaagataagagacgtagagaggaaaatt
atggagcagaaaggtcttgttgatagggcggattctgctaaggatttaaatgatgcaata
gtttttcagggcacatgtccggatatgtgtcctatatttgaacgagcaagaagaagcgtc
gaaaataatgttgtgaggtatgagaaagagcatcctgacgataagaagatttcaagggtc
aaagctctaaaggtattttcaaggcctgcggctgcagccgttcctcctttgccctctgat
gtgagacctccacatgttttggtgaagactttggattatatagttgagaatattatccaa
catttacctgagtgcgagagttttttgtgggacaggatgaggtcaatcagacaggatttt
acataccagaactattgcgggcctgaggctgtcgattgcaacgagagaattgtacgaatt
catttgcttattctccatgttatggtcaaagctgacgtggagtatattcgtcaacaggaa
ttggagcaattgcataaagcactgatcacgctctcagagatatatgaagaagtcaggcag
caaggaggaagctgtccgaacgaggcggaattcagagcttatgctttactaagtaagatt
cgagatccagaatatgatagagtgattcaaggcttaccgtctgaaatttttcataacgat
ttggttcagcttgctatatgttttagaagggtaatttccaacacttcttacatggagaga
ggtcacattaaaacagaaaatagccttaacctataccttaggttttttcagttgattaaa
tctggacaagtgccctttttaatgtgttcatttttagaagtttacgtgaatgaagttagg
ttctctgctatgaaggctttatctttgacaatctctaaaagacagaagaacatcccgttt
aactacttcatcgaaagtttgctcttcaataatgtggatgaacttctaagcttttgtcgt
tactattcaatagatacggatgactctggtgtttcattgaagtccttaaaacaccattcg
catttaattcccgaaactaaacctttgaaacaaagttaccttacatctgtggaggagaaa
ttaaaaagtgtatcactagttactttgataaactctggaaagccaaatgtaggtattcta
tctgaaaacagcaatgcacttttaactaaagcagtgaaaatagaggttacaccggaacca
atccaggtatctagtgaggccaaaactgaggacattgttgctggttctcaattagcatca
tcatcgctattgccattaccaggcatagacgaacaacatgtatctgacccacagccaact
agacatacgtttcaattgatgcagaatgcaaatgatggatctgaaagactggaacatttc
acctcgaaccctttggattcatcaacagttccacatgagggtcgaagttctaatacacct
tttacgggtatacaaccatttacggcctcctttccatttagtgccgacaatcatacacct
caaaaaagtttagaggaaacaataaaaacaaataaaactagaccatccgctcaagaacaa
tatcaggaaaaacatgagcagaacactgaggataaaaacttagcttcaaatagaaattcg
gatgaaactgaacatgtaatatttgaagaactggaacagctgaaagagcaaaaagaaatc
agaaatgaatatgtggtaaaacagctctcagacgctttgataggagacgttgttggtacc
aagttgtcttctctaattaaagacgaatttcgcaggaaagagcagaagcgtttgcaaata
aaaactttatccgaagctttatttaatgcatttattcatgaaacgttatatttcatatat
gcagaatcaaaatcagatttgttttacgaacgccatgtattaagaaaagtcttcaagaaa
tggtttaccaaatatcaaagcagtaagcttgagcgcgagtccagactcaaacataaagaa
gaattacaacaagttggtaaacagttgggaattccattcttaaaaagaccgcggacttcg
gattcccataactcatcaacttcaattatccaagcgaattcgtcttttatgaagacccca
aaagcttgggtatatacccccgttgcgacagaaacaaatcattttagcactccggtccgt
aggaattcagctttatggcttcctatcgacttgaaagaggagtattgcaaccgcatctca
gtttcagaagaacttattgcacattctgatctagcatcaaatgcagaccataaacaagac
agtgttggcttatatgtctattcaaaaaattggaattctatttcagggtcttggttatta
agcaaattctcattaaatgaccgtacctcatttgtctcatcaaatcgtgcggtgaagcta
tctgttataaaattgagtaacgattataatccaagcaaatttagcacacttcaattactt
gtgtttaataccggggttacagattccgatatttttgacttagaaatgaaaatgaaacag
gatggtgaaaagttgattgaattagtccatggaattgcgttaaacacgaattatagattt
agtctcttaattgtattttgggtatcagccgagaatccctgggatgataacgtcatagcg
aaatacttgaaattaaatacgattgcaagactgtttgggacaattatacaatccattgaa
ctttgcaaaatgaacaatgacagacctgacgaaatattactaagagggttagtcaagatt
gcggaaaattttaggttcgagctgactgagcgaggtgcctataatagatcaattatgaga
agaaacctagccggggctggtggattttcacatatgaacttaacagagcctttgagtgat
ctcgatgagaaactgcataaaatgattgaattagaaaaacggaagcacgatgcgtacaaa
aatagaaaaagcttatatgctcacttacagaaccatattaatgcatctccaaaacttaaa
aagacaaagttacctgttttgctctctgaaaaccataagaataggtctaagacccctcag
agaattttaccacattggaggtctctttctgaatctccgggttcctcgctaacatccatt
tcttcacacctggcgggcaaggtgaaacatcttccaccttcaataccaacttatggaaca
ccaagtcaacttgctccatcaccaagcagtggtgacaataagttgatctttcaaacgccg
tcagcagcaattctaggcggtagcagtacaagcatacctattgctggaactgctaataca
agcggactgtctaacatcaccatcgccccgccattaatgacacccatcacccaaacagtc
ctcgaaactcccccacccaaggagcggcagaactacgttaataataattacgatccgaac
gttggcactgattccttcatcaacaaaaatcaaagcgaatccgctggtgtgaccccgggc
tccatggtcttacgagaagcccctaaaataataagatgtggcttccgcatcatgtcacaa
acttctgaaccccctcaggaatcatctcctgataacagggaacaagtaccggacagtgtg
ctagaattgaaggacctaatagcaagtgttaagagcaagctgaagaagtaa
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