Eremothecium cymbalariae: Ecym_4254
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Entry
Ecym_4254 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
erc
Eremothecium cymbalariae
Pathway
erc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ecym_4254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
erc03021
]
Ecym_4254
03036 Chromosome and associated proteins [BR:
erc03036
]
Ecym_4254
Transcription machinery [BR:
erc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Ecym_4254
Coactivators
SAGA/TFTC/STAGA complex
Ecym_4254
Chromosome and associated proteins [BR:
erc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
Ecym_4254
STAGA complex
Ecym_4254
TFTC complex
Ecym_4254
SAGA complex
Ecym_4254
SLIK complex
Ecym_4254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
TFIID-31kDa
Histone
Syntaxin
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
11469467
NCBI-ProteinID:
XP_003646136
UniProt:
G8JTG6
LinkDB
All DBs
Position
4:527580..529169
Genome browser
AA seq
529 aa
AA seq
DB search
MSNNGQQGNGQVPQLTPPSLQQLAYKFTTLVDEAQRVGVQTPEGLELLKKASKVKAIYET
YNRQRQQAQQAFRVRNTAQTGAQPQQQLPAGQPQPQQQQQQQPPPQPQPQQPQQPQQQQL
KQQRPASSVASNIKMLLNPQQREAYERLTQTFNESAKNIKGEYEFLKKNIEVLDTEIKNR
QSEPITVRQLESKKNELLMKLTSLNTQFQTLPKKFQEDKKKFYIECAATNMNLKKFLQAT
SQQQRANTGNTGTTSSPAPTQPSGSVGTPNSAVPVSTNSVNTGNTATPQQSKQQPQQRSN
SGISRSPTQVTPVNAAANQNSNGAARPVIFKQPNPSIPIPESVSPISTTSVSYRSNRPTI
TGGSAMNAAALTTPVMTKLPPYEVDSERVMSKRKLRELVKSVGIDDGDGETTIDGDVEEL
LLDLADDFITNVTSFACRLAKHRKSDNLDVRDIQLHLERNWNIRTPGYSADEIRSTKKWN
STPAYGQKMQVITSAKAAKLSPTAASTNVNSNAASSTTSNTIIAEANKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataacggccaacagggaaatggtcaagttccacaactgacaccaccgtctttg
caacaattggcctataaatttaccacactagtcgatgaggctcaaagagttggcgttcaa
actcctgaaggtttggagttgctgaagaaggcctcaaaagtgaaggctatctatgaaaca
tacaacagacaaaggcagcaagctcagcaggcattcagagtgaggaatacagctcagaca
ggagctcaaccacagcagcaattgcctgcgggccagcctcagccacagcagcagcagcag
cagcaaccaccaccacaacctcaacctcagcaacctcagcaacctcagcagcagcaacta
aaacaacaaagaccggcgtcttctgttgctagtaacatcaagatgcttctaaatccacaa
caacgagaggcttatgaaagactaactcagacttttaatgaaagtgccaagaatatcaaa
ggtgaatatgagtttttgaaaaagaatatcgaggtgttagatactgagataaagaatagg
caaagcgagccgataaccgtaagacaattggaatcgaaaaaaaatgaactattaatgaaa
ctaacaagtctaaatactcagtttcagacgttgccaaaaaagtttcaggaagataagaag
aaattctacattgaatgtgcagccactaacatgaacttgaaaaaattcttacaagctaca
agtcaacagcaaagggcaaatactggcaatacaggtaccacaagttcgcctgctccaact
caaccaagcggcagtgtcggcactccaaattcagccgtacctgtgtcaaccaattcagtg
aatacgggcaacactgctaccccacaacaatcaaaacagcaaccgcaacaaagatctaac
agtggtattagcagatctcctactcaagtcactcctgtaaatgctgcagcaaatcagaat
agtaatggagctgcgagacccgtcatttttaaacaaccgaatccctccattcctataccg
gaaagcgtatccccaatctcaacaacatcagtctcttataggtccaataggcccacaata
acaggtggaagtgcaatgaatgctgccgcgttgacaactcccgtcatgacaaagctacct
ccttatgaagtggacagcgaaagagttatgtcaaaaagaaaattaagagaattggtgaaa
tcggtaggcatagatgacggtgatggcgaaaccaccatagatggcgatgttgaagaatta
ttattggacttagctgatgacttcatcacaaatgtgactagttttgcttgcagattagct
aaacacagaaaatccgataaccttgatgtccgagacattcaattgcatttagaaagaaac
tggaacatcagaacacccggttattctgcagatgaaattagaagcactaaaaaatggaat
tctacccctgcatacggtcaaaaaatgcaagttattacctctgctaaagctgctaagttg
tctccgactgcagcatccactaatgtgaactcaaatgccgcttcttctacaacctctaat
acaattatagctgaagctaacaagaaataa
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integrated database retrieval system
