KEGG   Eremothecium cymbalariae: Ecym_4255
Entry
Ecym_4255         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
erc  Eremothecium cymbalariae
Pathway
erc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Ecym_4255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:erc03009]
    Ecym_4255
Ribosome biogenesis [BR:erc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    Ecym_4255
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML DSE1_N Utp12 Beta-prop_WDR75_1st Beta-prop_TEP1_C ASA1 Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_Aladin WDR90_beta-prop_4th CFAP251_N Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR41 WDR54 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_NWD2_C WD40_like Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_SPT8 WD40_RFWD3 PAC11 Hira WD_LRWD1 DIKK1-2-4_C-subdom1 ELYS-bb
Other DBs
NCBI-GeneID: 11469468
NCBI-ProteinID: XP_003646137
UniProt: G8JTG7
LinkDB
Position
4:529455..532268
AA seq 937 aa
MVNSYQRFEQRSFFGVIASNSNCVWIPTEGSRTSPGQIITSSLENINCWDIKTGNLLKTL
SDSIPPGSIDAKYEKPAEVAYLEYHHETNLLAAGYADGVIKIWDMQTQTVLIIFNSHTAA
ITFLKFDPSGTRLISGSRDSNIIIWDLVGEVGLCKLRSHKDSITGIWFENDDWLISTSKD
GLIKVWDIKSQQCVETHMAHTTECWSLAISDDLVVTANADSELKIWELDLERENGSKLKE
KGIYEKQSRQRSVDVKIVTNPDEVKFFYVQNADKTTEVFRIRTSSELSKALKKREKRLKE
KGISEDEIQEKIKSSFVNDIIQPFQVVRSSFKFKSAAWTRCSLSKLELVFTTSNNTIEYY
SIPYKNQKPTQVAASKLYTIELQGHRTDVRSIDISEDNKLLAAASNGMLKIWNITTQSCI
RTFDCGYALCCKFLPGGTLVVVGTRGGELQLFDLASSIVLENKEAAHDAAIWSLDLTSDG
RRLITGSADKTVKFWNFQVEKELISSSTDKYNSRLQMVHDTTLELGEDILSVKISPEDRF
LAVSLLDNTVKVFFLDSMKFFLSLYGHKLPVLSIDISYDSKLIITSSADKNIKIWGLDFG
DCHRSLFAHQDAIMNVKFVPQSHNFFSCGKDGVIKYWDGVKFDCIQKLIAHKSEVWALAL
SSDGQFFVSVSHDRSIRVWEETEDQVFLEEEREKEMDEQYEEKLLSTLENDASDEKFARN
SEEDTDVTEVTDVHKQTIESLKAGERLMEALDLGISELEAQEEYHRNLLLWNKNKSGDQP
MKPQSNSILIAVNKLPEEYIMDTLVRIKPAQLEDALLVLPFSYVLKFLKFIDASIEKKQL
VNNHLPLICRNLLYVVKINHKELIAQKNEELKLQINKVKDKLRAALKGNIDDLGFNIEGL
KFIKQQWNVKHNFEFVDEYDQRDAETKSSKKRVFTTV
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggttaattcataccagagatttgagcagcgaagttttttcggtgttattgcatcgaat
agcaattgtgtttggatcccgacagaagggtccaggacatccccaggacaaatcataact
agttcactagaaaatatcaattgctgggatatcaagactgggaacttgttgaagaccctc
agtgattctattccccctggttcaattgatgctaaatatgaaaaaccagcagaagtcgca
tatttagaatatcatcacgagaccaatttgttggccgctggttatgccgatggtgtcatt
aaaatctgggatatgcagacgcaaactgtgttaatcattttcaacagtcatacggctgca
attacctttttgaagtttgatccttccggtacaaggctaatatcaggatctcgtgattcg
aatatcattatttgggatcttgtgggtgaggttggactatgtaaattacgttctcataaa
gattctatcacaggtatttggtttgaaaacgatgattggttaattagtacttctaaagat
gggttgataaaggtttgggatataaaatcgcaacaatgtgtggagacgcatatggcacac
acgaccgaatgttggtctctagctatttcagatgatttagttgtgacagcgaatgcggac
tctgaattaaaaatttgggaattggatctagaaagagaaaacggttctaaattaaaagaa
aaaggcatttatgagaaacaaagcagacaaagatccgttgacgttaagattgtaactaac
ccagatgaggtcaagtttttctatgttcaaaatgcagataagactacggaagttttcaga
attcgaacttcatcagagctttctaaagcattgaagaaaagagaaaaaagattgaaggag
aaaggtattagtgaggatgaaattcaagaaaagattaaatcctccttcgttaacgatatt
attcaaccattccaagttgttaggtcatcattcaaatttaaatctgctgcatggacgcgt
tgctcgttatctaaattggagttagtatttactacctctaataacaccattgaatattat
tcaatcccttacaaaaaccagaaaccgactcaggtggctgctagcaaactatataccatc
gaattacaaggccataggaccgatgtgcgctccattgacatcagcgaagataataaatta
ttagctgcggcatctaatggtatgttaaaaatttggaatattacgactcaaagctgtatc
agaaccttcgattgtggctatgcattgtgctgtaaatttttgcctggtggaactttggtt
gtcgtgggtacgagaggtggagagttgcagttgttcgacttagcctcttccatagttttg
gagaataaggaggctgctcatgatgcggcgatttggtcattagacttgaccagtgatgga
agaagattgattacgggctctgcagataaaaccgttaaattctggaacttccaagttgaa
aaagaactaatttcatcgagcactgataaatacaactccagattgcagatggttcatgat
accactctagaattaggtgaagatatcctatctgtaaaaatttcacctgaagacagattt
ttagcggtatcgttattagacaacactgtaaaggtcttctttttggattcaatgaagttt
ttcctaagcttgtatgggcacaaactaccagtattatcaatagacatatcttatgattca
aaattgatcattacatcatctgcagacaaaaatattaaaatttggggcctggatttcggt
gactgtcacaggtcattatttgcccatcaagacgcaatcatgaatgttaaatttgttccg
cagagccacaatttttttagttgtggtaaagatggtgtgatcaagtattgggatggtgta
aaattcgattgcattcagaagctaattgctcacaaaagtgaagtatgggcgttagcatta
tctagtgatggtcaattcttcgtgtctgtttctcacgatcgtagtattagggtttgggaa
gagacagaagatcaggtattcctggaggaagaaagagagaaggaaatggatgaacagtac
gaagagaagttgttaagtactctagagaacgatgccagtgatgagaaatttgctagaaat
tcagaggaagatacagatgtgacagaagtgacagatgttcataaacaaacaattgaatcg
ctaaaggctggtgaacgattgatggaagctttggatttgggtatttcagagcttgaagcg
caagaagaataccaccgtaatttattattgtggaataaaaacaaatctggtgatcagcct
atgaaacctcaatcaaattccattttaatcgcggtaaataagttacctgaggaatacata
atggacacgttggttaggattaagcctgcacagttagaagatgctttgttggtacttcca
ttttcctatgtgctaaaatttttaaaattcattgatgcaagcattgagaagaagcagcta
gtgaataatcatttaccgttgatctgtaggaacctcctatatgtggttaaaataaaccat
aaagagttgattgcccaaaaaaatgaggaattaaaattacagattaacaaagtgaaagac
aagctacgggctgcattgaagggcaatatagacgatcttgggttcaacattgaaggtttg
aagttcattaaacaacagtggaatgttaaacataacttcgaatttgttgacgaatatgat
caacgggacgctgaaacgaagtcttctaaaaagagggttttcactacagtctaa

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