Eremothecium cymbalariae: Ecym_4255
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Entry
Ecym_4255 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
erc
Eremothecium cymbalariae
Pathway
erc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Ecym_4255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_4255
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Ecym_4255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
DSE1_N
Utp12
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ASA1
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR41
WDR54
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
WD40_like
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_RFWD3
PAC11
Hira
WD_LRWD1
DIKK1-2-4_C-subdom1
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
11469468
NCBI-ProteinID:
XP_003646137
UniProt:
G8JTG7
LinkDB
All DBs
Position
4:529455..532268
Genome browser
AA seq
937 aa
AA seq
DB search
MVNSYQRFEQRSFFGVIASNSNCVWIPTEGSRTSPGQIITSSLENINCWDIKTGNLLKTL
SDSIPPGSIDAKYEKPAEVAYLEYHHETNLLAAGYADGVIKIWDMQTQTVLIIFNSHTAA
ITFLKFDPSGTRLISGSRDSNIIIWDLVGEVGLCKLRSHKDSITGIWFENDDWLISTSKD
GLIKVWDIKSQQCVETHMAHTTECWSLAISDDLVVTANADSELKIWELDLERENGSKLKE
KGIYEKQSRQRSVDVKIVTNPDEVKFFYVQNADKTTEVFRIRTSSELSKALKKREKRLKE
KGISEDEIQEKIKSSFVNDIIQPFQVVRSSFKFKSAAWTRCSLSKLELVFTTSNNTIEYY
SIPYKNQKPTQVAASKLYTIELQGHRTDVRSIDISEDNKLLAAASNGMLKIWNITTQSCI
RTFDCGYALCCKFLPGGTLVVVGTRGGELQLFDLASSIVLENKEAAHDAAIWSLDLTSDG
RRLITGSADKTVKFWNFQVEKELISSSTDKYNSRLQMVHDTTLELGEDILSVKISPEDRF
LAVSLLDNTVKVFFLDSMKFFLSLYGHKLPVLSIDISYDSKLIITSSADKNIKIWGLDFG
DCHRSLFAHQDAIMNVKFVPQSHNFFSCGKDGVIKYWDGVKFDCIQKLIAHKSEVWALAL
SSDGQFFVSVSHDRSIRVWEETEDQVFLEEEREKEMDEQYEEKLLSTLENDASDEKFARN
SEEDTDVTEVTDVHKQTIESLKAGERLMEALDLGISELEAQEEYHRNLLLWNKNKSGDQP
MKPQSNSILIAVNKLPEEYIMDTLVRIKPAQLEDALLVLPFSYVLKFLKFIDASIEKKQL
VNNHLPLICRNLLYVVKINHKELIAQKNEELKLQINKVKDKLRAALKGNIDDLGFNIEGL
KFIKQQWNVKHNFEFVDEYDQRDAETKSSKKRVFTTV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggttaattcataccagagatttgagcagcgaagttttttcggtgttattgcatcgaat
agcaattgtgtttggatcccgacagaagggtccaggacatccccaggacaaatcataact
agttcactagaaaatatcaattgctgggatatcaagactgggaacttgttgaagaccctc
agtgattctattccccctggttcaattgatgctaaatatgaaaaaccagcagaagtcgca
tatttagaatatcatcacgagaccaatttgttggccgctggttatgccgatggtgtcatt
aaaatctgggatatgcagacgcaaactgtgttaatcattttcaacagtcatacggctgca
attacctttttgaagtttgatccttccggtacaaggctaatatcaggatctcgtgattcg
aatatcattatttgggatcttgtgggtgaggttggactatgtaaattacgttctcataaa
gattctatcacaggtatttggtttgaaaacgatgattggttaattagtacttctaaagat
gggttgataaaggtttgggatataaaatcgcaacaatgtgtggagacgcatatggcacac
acgaccgaatgttggtctctagctatttcagatgatttagttgtgacagcgaatgcggac
tctgaattaaaaatttgggaattggatctagaaagagaaaacggttctaaattaaaagaa
aaaggcatttatgagaaacaaagcagacaaagatccgttgacgttaagattgtaactaac
ccagatgaggtcaagtttttctatgttcaaaatgcagataagactacggaagttttcaga
attcgaacttcatcagagctttctaaagcattgaagaaaagagaaaaaagattgaaggag
aaaggtattagtgaggatgaaattcaagaaaagattaaatcctccttcgttaacgatatt
attcaaccattccaagttgttaggtcatcattcaaatttaaatctgctgcatggacgcgt
tgctcgttatctaaattggagttagtatttactacctctaataacaccattgaatattat
tcaatcccttacaaaaaccagaaaccgactcaggtggctgctagcaaactatataccatc
gaattacaaggccataggaccgatgtgcgctccattgacatcagcgaagataataaatta
ttagctgcggcatctaatggtatgttaaaaatttggaatattacgactcaaagctgtatc
agaaccttcgattgtggctatgcattgtgctgtaaatttttgcctggtggaactttggtt
gtcgtgggtacgagaggtggagagttgcagttgttcgacttagcctcttccatagttttg
gagaataaggaggctgctcatgatgcggcgatttggtcattagacttgaccagtgatgga
agaagattgattacgggctctgcagataaaaccgttaaattctggaacttccaagttgaa
aaagaactaatttcatcgagcactgataaatacaactccagattgcagatggttcatgat
accactctagaattaggtgaagatatcctatctgtaaaaatttcacctgaagacagattt
ttagcggtatcgttattagacaacactgtaaaggtcttctttttggattcaatgaagttt
ttcctaagcttgtatgggcacaaactaccagtattatcaatagacatatcttatgattca
aaattgatcattacatcatctgcagacaaaaatattaaaatttggggcctggatttcggt
gactgtcacaggtcattatttgcccatcaagacgcaatcatgaatgttaaatttgttccg
cagagccacaatttttttagttgtggtaaagatggtgtgatcaagtattgggatggtgta
aaattcgattgcattcagaagctaattgctcacaaaagtgaagtatgggcgttagcatta
tctagtgatggtcaattcttcgtgtctgtttctcacgatcgtagtattagggtttgggaa
gagacagaagatcaggtattcctggaggaagaaagagagaaggaaatggatgaacagtac
gaagagaagttgttaagtactctagagaacgatgccagtgatgagaaatttgctagaaat
tcagaggaagatacagatgtgacagaagtgacagatgttcataaacaaacaattgaatcg
ctaaaggctggtgaacgattgatggaagctttggatttgggtatttcagagcttgaagcg
caagaagaataccaccgtaatttattattgtggaataaaaacaaatctggtgatcagcct
atgaaacctcaatcaaattccattttaatcgcggtaaataagttacctgaggaatacata
atggacacgttggttaggattaagcctgcacagttagaagatgctttgttggtacttcca
ttttcctatgtgctaaaatttttaaaattcattgatgcaagcattgagaagaagcagcta
gtgaataatcatttaccgttgatctgtaggaacctcctatatgtggttaaaataaaccat
aaagagttgattgcccaaaaaaatgaggaattaaaattacagattaacaaagtgaaagac
aagctacgggctgcattgaagggcaatatagacgatcttgggttcaacattgaaggtttg
aagttcattaaacaacagtggaatgttaaacataacttcgaatttgttgacgaatatgat
caacgggacgctgaaacgaagtcttctaaaaagagggttttcactacagtctaa
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