Eremothecium cymbalariae: Ecym_4260
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Entry
Ecym_4260 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K15079
structure-specific endonuclease subunit SLX4
Organism
erc
Eremothecium cymbalariae
Pathway
erc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Ecym_4260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erc03400
]
Ecym_4260
DNA repair and recombination proteins [BR:
erc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Ecym_4260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
DUF6074
Motif
Other DBs
NCBI-GeneID:
11469471
NCBI-ProteinID:
XP_003646141
UniProt:
G8JTH1
LinkDB
All DBs
Position
4:541585..543459
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AA seq
624 aa
AA seq
DB search
MDFSRAQRNLLLVEDVSDDEKVHEQNIAETQVPMMFSYEEEDELAKDEREQEVEKDDEVF
ISTQVQGRIDELEGTENNRKQFKRLLANFTYATEADGIGLQGDEVPETVLSSGKSLEMNT
IKRSRRSDTRVKSITKYNTENYALQIKQDRARRLLTMLSGKSHKIKNLLKDIKQKDEHRS
DPIDFSTFNCEEWSQIEKLLRERLPKVSRAKVALVKDFVYGKEQQEHPWYSSQLPPGDCP
TDLTDSHGIYVGNCEDMVGQKVFTLSQLLDDDDNNEPNGIGLEEEEGLTSSSSNTQPSIP
DSVDSGEPIGNMTHDIIADVNTTTLLAVGKQDTASNVDWHFKRGSTPDESPDNLPIHEDT
VIDLTQETFRAVSNIASPVKATSRPNSKVLSATRKPSIQVPASNTASINTPASFMSLHRP
PLIEAPVCSSIIRMKIYKDTEMNFNDKNAPPLGFQPQTIYEDIVADSEDENYTILELEPC
KNEEPVRPATDPCILGVNKSTSTQDSSPTATAQSIKQLRQSLKTIGVKTSRSNAQVLQHY
NTVSQQLHSQSDEDKRNELFLRLTHLLQQDKPLLNRIYCFHPITIHDLRTSFESRDHFTN
LIDDAVIRHWADYQGICVKNDLNE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagcagggctcagcgaaatttgttgcttgtggaggatgtatctgacgatgaa
aaggttcatgaacagaatatagcggagactcaagtgccgatgatgttcagctatgaggag
gaagatgaattagctaaagatgaacgagaacaagaagtggagaaggatgatgaagtattt
atttctactcaggttcagggtcggattgatgaactggaagggacggagaacaacaggaaa
caatttaagcggcttttggctaattttacatatgctactgaagccgatggcatagggttg
caaggcgatgaggtaccagagactgtgttgagtagtgggaagtctttagagatgaacact
ataaagaggagcagacgttctgatactagggtgaagagtattacgaagtataacacggag
aattatgctcttcaaattaaacaggatagagcacgacggctactaacaatgctttcaggt
aaatcacataagataaaaaatctgctgaaagatattaaacaaaaagatgagcatagaagt
gatccgatagacttctcaacatttaactgcgaagaatggtcacaaattgaaaagttactt
cgtgaacggttgccaaaagtttccagagcaaaggtagcattggtaaaagatttcgtttac
ggtaaggaacaacaagaacatccttggtattcttcacaacttcctccaggagattgtccc
acagatctaacggatagccacggcatatacgtggggaattgtgaagatatggtagggcag
aaggtgttcacgttgtcacagctgctagacgatgatgataacaatgagcccaatggtatt
ggtttggaggaggaggaaggcttgacctctagttccagcaatacccaaccttcgatacca
gacagcgtggattctggggaaccgataggaaacatgactcatgatataattgcagatgta
aatacgactacactcttagcggtagggaaacaagacactgcttccaacgtggattggcat
tttaagcgggggtccacgccagatgaatcgcctgataacctgccaatccacgaggatact
gttatagacttaacgcaagaaacttttcgagctgtgtcgaatatagcatcacccgttaaa
gccactagtcgacccaacagcaaagtattatcagctaccagaaagccaagcatccaggtt
ccagcaagtaacactgcatcaataaatacgccggcttcatttatgagtctgcatcgtcct
ccactcatagaagcccccgtttgcagttctattatccgtatgaaaatttacaaggataca
gagatgaactttaacgacaagaatgcacccccattaggattccaaccccagaccatatac
gaagacatcgttgccgacagtgaagacgaaaattacacaatactagagctcgagccctgc
aaaaacgaagaacctgtccggcccgctaccgatccttgcattctcggagtcaacaaaagc
acatcaacccaagattcctccccaactgccactgcacaatcgataaaacaattaaggcaa
tcgctcaaaacaattggcgtaaaaacatctagatccaatgcccaggtactacagcactac
aataccgtatcccaacaactccactcccaatccgacgaagacaaacgcaacgaactattc
ctacgcctaacccacctgctacaacaagacaaacccctcctaaaccgcatctactgtttc
catcccatcaccatccatgaccttagaacctccttcgagtcaagagaccatttcaccaac
ctcatagacgatgccgtcatccgacactgggctgactaccaagggatctgtgttaaaaat
gatcttaacgaataa
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