Eremothecium cymbalariae: Ecym_4433
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Entry
Ecym_4433 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_4433
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
90S particles
Other 90S particles
Ecym_4433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
NBCH_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Cytochrom_D1
WD40_like
Motif
Other DBs
NCBI-GeneID:
11472804
NCBI-ProteinID:
XP_003646296
UniProt:
G8JTX6
LinkDB
All DBs
Position
4:complement(893223..894923)
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AA seq
566 aa
AA seq
DB search
MATGVRGSSRKRTRRLAKAKVPVNDEEITDVSSNDENEFSVEEMDDGHEETLDSDEEFSA
ENPADKRRRLAKQYLENIKNDANEIVQGDDNATPFRDQAAGAESAIDNYNNFDARELDRD
IIASRLKQDVAEQQGRVYRWIANKMLITEAKVSFTRVGEKNLTGLSCYQPLLNKFVHEDV
QMKSKGRIFVYTVSKDVQLTKYDVTDFKARPKRVKYTKGSKYIPEGNHGFENTTEGHYDE
ILSVAASPDGKYVVTGGRDKKLIVWSTESLVPVKVIPTKDRRGEVLALAFRKNSDQLYVA
CADLKIRTFAINQFAQLEVLYGHQDIVADISALNMERCVTVGSRDRTAMLWKIADETRLT
FRGGENTEKLLRKWEKAHADEEGLEPPMFYGEGSIDCVAMIDDSHFVTGSDNGNIALWSL
SKKKPIFVERTAHGVLPLSKAASISAERNAELCTQQLQGNKLSQPYWITALHAVPYSNVF
FSGSWDGCLRVWKLQENMREFMLLGKLPNCKGLVTQLQTVESGKHGRETLRVLASVSKEH
KLGRWQGKISGARNGIYSAVIEQAGY
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctactggtgtccgaggatcctctaggaagagaactaggcgtttagctaaagctaag
gttcctgttaacgatgaagagattacagatgtctcttccaatgatgaaaatgaattctca
gtagaggaaatggatgatggccatgaggaaacgttagactcagacgaggaattctcagct
gagaatcctgcagataagagaagaagacttgccaagcagtacctggaaaatataaaaaat
gatgcgaatgagatcgttcaaggagatgataatgccacaccttttcgggatcaggcagca
ggagcagagtctgcgatcgacaattacaacaattttgacgcccgtgaactcgaccgtgat
atcattgcgtctaggttaaagcaggatgttgcagagcagcaaggtcgtgtgtataggtgg
attgcgaacaagatgttaatcactgaagcgaaggtatcatttacaagggtgggggagaag
aatctgactggactgagttgttaccaaccgttactgaataagtttgtgcatgaagatgta
cagatgaagagcaaaggaagaatttttgtatataccgtgagtaaagacgtacaattgacg
aaatacgatgttacggatttcaaggccaggcccaagagggttaagtatactaagggaagt
aagtacattccagaaggcaaccacgggtttgaaaacacaaccgagggccattacgacgag
atattaagcgttgcagcatctccagatggtaagtatgttgttactggtggtcgtgacaag
aaattaattgtttggagtacagagtcattggtaccagtaaaggtgatacctactaaggac
cgtagaggagaagtgttagccttagcattccgtaagaattcggaccagctatacgtagct
tgtgcagacttaaagatcaggacttttgctattaaccagtttgctcaactggaagttctg
tatggccaccaagatattgtagctgatatttccgcgttaaacatggagcggtgtgtaaca
gtgggatctcgtgatcgtacagcaatgttatggaaaatcgctgatgaaacaagactaacg
ttcagaggaggcgagaacacagagaagttgcttagaaagtgggagaaagctcatgccgac
gaagagggtctagagccgcctatgttttacggcgaaggcagcatagattgtgtagcgatg
attgacgactcgcactttgtgaccgggtctgataacggcaacattgcattatggtcacta
tcaaagaaaaagcctatatttgttgagagaactgcacatggagttctacctctttcaaaa
gcggcaagcatatctgcagagaggaacgcagagctgtgcacacagcagctacaaggcaac
aagttgagtcagccatattggatcactgcattgcacgcagtgccatatagcaacgtcttc
ttcagcggttcctgggatggctgtttgcgggtgtggaaactacaagaaaacatgcgtgag
tttatgctattgggcaaattacctaattgcaaaggtcttgtaacccagctacagactgtt
gagagtggaaaacatgggcgcgagacattgcgtgtgctagccagtgtcagtaaagagcac
aagttgggaagatggcaaggcaaaatttcaggtgctagaaacggcatttattcggcggtc
atcgaacaggccggatattga
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