Eremothecium cymbalariae: Ecym_4674
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Entry
Ecym_4674 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
erc
Eremothecium cymbalariae
Pathway
erc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Ecym_4674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4674
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Ecym_4674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TFIIA
Motif
Other DBs
NCBI-GeneID:
11471651
NCBI-ProteinID:
XP_003646512
UniProt:
G8JSH3
LinkDB
All DBs
Position
4:1311773..1316137
Genome browser
AA seq
1454 aa
AA seq
DB search
MSMFSTPLKSNVGYTNALIPNNTPMTGGGVGDNMSGDKSAVLTAASAAAAVAAGVSANQF
QLSTYNPMSVNSSNEHVRVNGLGTRAPLDLASHYIDHLQRRDESTAVLDERSYYNNGVNY
NFSKEIGGLGAFTPFERVNVINIPDEILQEVSKAEIKNDMGIFPELDRCWIIIDNKLILW
NIKDPTDFQSIDDVKHTILKVKLVKPKHDMFVNNINYMLVIATPFDVYLLAVSYKKLAGE
LNIYNTGMCVSVNGLDVYDIVSYEKTGQIFFVGKVNGTNIWELQYSSSEDWFNSKCNKVC
LTQLALSSLLPTNIISKFPGSGIIRSFFEEESKFSQEWIVQLAVDQSRGILYSLSSKSTI
RAYKVNARSIDGPISIEPGYIKRIIGTTTAKGAAILGNNYLKISKIIVVSQSENNNLFLV
AITIGGVRLYFNGSLSPSNVEALTLESIKFPPSSVTSEAIEQELQQQQQQQQIKAIPFYS
SLNSSESIQLKYQKKSSVLLETTSASTIVSPGIFFSSVIKKTLSPQQQQQQQQQQQQQSV
QSNSAPSARPAVQYKLFVSVPDYGILKQHGKYIENATFLDTTGFIKDIAPITPLFNATNK
PEGYANEFATQYSPECLKIAVLTNTSVEIYRYRTPDQVFESLIENPLPFVLNFGMAEACS
SALFVTCKFNRAESLRSNALTFFTVGIPNVVEIKPRYNNYAASAVSSLLIKPPVATTPQK
SNIINSSNSNMNSNYNLDDVVLSPRFYGIALLITRLFRDIWNKNIFTVKDAAKYDYHGNL
VKDSVPDCDLISMVSISKQDLEYYLSSIMILNEFFTSYGTSITTITSTGLTDGKVVDRSE
EVAHQAEVIAVSALIRLVQSMKEALSFLNVLFEESEIEGFEGQYLAFKDIMKFLSLDIQS
DLTKLKFKDIFAPNDNSKGLVREILSSIINRNISRGGFIEYIATALQERCGSFCSSGDVL
GFRAVEHLRKAKEVGLRDLDTLNYHLTNATRLFEKIVDDISIDKLKEAVSIMVELNYYPK
TIEFLLNIANSVDKGRLAYQYVSDGCLEHDEKKKYFDKRVAIYDLVFETLISIDDLASKN
TQASPPNKYSQENNEFTKLREESYHTALTYDDKLFHYQLYDWLVSQNSQDKLLQLDTVFI
LPYLQEKSVSSLEISNLLWVYQSKRSNFLSAAQILYSLSFSDFDIGLNTRIEYLSRANGF
CNGVCPPNQRHQMIQLSSMVQELFDVAVVQDELLALVKNDSRIDEENKKELIKQLNGKIL
PVSDLFNDFADPLGYYEVCLTIFKISDFRNYEEIMSKWMELFDSLKDELKSGSNDIDESS
NFINLLSSVVIKTGKSVRTSEFVFPISDLLPVISNLFSESLPKDHVQPGAVASIFISAGV
SYDKLYYVLKDLIETSESTNTTYKTEIAWLIKDWYRSDRKLRDIITYDDLRNLEEYSIET
DPIDKYMKRTGNSI
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgttttcaacacctttgaaaagtaatgttgggtacacgaacgcgttgattcca
aataacacgccgatgacaggaggtggggttggggataatatgagtggtgataagtcggct
gtgctgactgcggcgtcggcggcagccgcagtcgcggcaggagtgtccgctaatcagttt
cagctttctacgtataatccgatgagtgtgaatagttctaatgaacatgttcgtgtcaat
ggacttgggactagggcacctcttgatttggcgtcgcattatattgatcacttgcagcgg
cgggacgaatcgacggcggttttggatgagaggtcttattacaacaatggggtgaattat
aacttttctaaggagattgggggacttggagcgtttactccatttgaacgcgtaaatgtg
atcaacatacctgatgaaattttacaagaagtttcaaaggctgagattaaaaacgatatg
gggatatttccagagttggatcgttgctggattattattgataacaagttgatcctttgg
aacattaaagatcctacagactttcagtcaattgacgacgttaagcatacaattctaaag
gtaaaattggttaaacctaagcacgatatgtttgtgaataatatcaactacatgttagtc
attgctactccctttgatgtgtacttgttagcagtttcatataaaaaactcgcaggagaa
ctcaacatttataacacaggtatgtgtgtatctgttaacggtttagatgtttacgatatt
gtgtcctatgagaaaacaggccaaatcttttttgttggtaaagtaaacggtaccaatatt
tgggaattgcaatattccagctctgaggattggttcaacagtaaatgtaataaggtgtgt
ttgacgcagcttgcattgtctagtttgcttcctactaatataatatccaagtttcctggg
agcggtataatacgctcctttttcgaagaagagtctaaattctctcaggaatggatagtt
caacttgctgtggatcaatctcgtggtatcttgtattccctctcatcaaagtctacgata
agggcttataaagtgaatgctcgatctatagatggcccgatctctattgaaccaggttat
attaaacggatcattgggactacgactgcaaaaggagctgcgattctgggaaataattat
ttaaagatctcaaagattattgtcgtttcgcaatctgaaaacaataacttgttcttagtt
gccattactataggtggggttcgtttatatttcaacggttcattaagtccaagtaatgtg
gaggctctaacattggaatccattaaattccccccaagttcggtcacatcagaagctatt
gaacaggaattgcaacagcagcaacagcaacaacaaattaaagccataccattttattcc
tcattgaattcttctgaatcaatacaattgaaataccaaaaaaaatcgtcagtcttgctg
gagactacatcagcatctacaattgtatcacccggtattttcttctcatctgtaattaag
aagacattatccccacaacaacaacagcagcagcagcagcagcagcagcagcaatccgtt
caatcaaattcggctccatctgcaagaccagctgttcaatacaagctatttgtcagcgtg
ccagattacggaattctaaaacaacatgggaaatacattgaaaatgccacttttctggat
accacagggttcataaaagatattgcacctatcacgccgttatttaatgccacaaataaa
ccagagggatatgctaacgaatttgccactcagtatagcccagaatgtttgaaaattgct
gttttaaccaacacttctgttgaaatctatcgttatcgcactccagaccaagtgtttgaa
tcgttgattgaaaatccattgccatttgttttaaactttggtatggcagaagcatgctct
tcggctttattcgtgacctgtaaatttaacagggccgaatctcttaggtctaatgcgttg
acattctttacagttggtattccaaacgttgttgaaattaaacctagatataacaactac
gctgcctctgctgtttcttctttgttaatcaaaccgcctgttgcgacaacacctcagaaa
agtaatattattaacagttcaaactcaaatatgaacagtaactacaacttggatgatgtt
gttttgtcgccaagattctatggtatcgctttgttgatcacccgattgttcagagatatt
tggaataagaacatctttactgtaaaagatgctgcaaaatatgactatcatggtaacttg
gttaaggactcagtcccggactgtgatttaatatccatggtctccatttcgaagcaagat
ctcgagtattacttgtcttcaattatgattttgaatgaattcttcacttcatatggtaca
tctatcacaacgattacttcaactggattaactgacggcaaagttgttgatcgatcagag
gaagttgctcatcaggcagaagttattgctgttagcgcattaattaggttggtacaatct
atgaaggaagcattgtcttttctgaatgtgttatttgaggagagtgaaattgaaggcttt
gagggtcaatatttggcgttcaaggatatcatgaagtttttgagtcttgatatccaatca
gatttgactaagttgaagttcaaagacatctttgctccaaatgataattctaaaggctta
gttagggaaattttgtcatctataatcaacaggaatatatccagaggtggtttcatcgaa
tatattgcaactgctttgcaagaacggtgcggttcattctgctctagtggagatgttcta
ggttttagagctgttgaacatttaagaaaggccaaggaggtgggtctgagagacttggat
acattaaactatcatttaaccaatgctacaaggttgtttgaaaaaatagttgatgatatt
tctatcgacaagttaaaagaggctgtctcaataatggttgaattgaattactatcctaaa
actattgaatttttattgaacattgctaactctgttgacaagggtaggctagcatatcag
tacgtttctgatggctgtttagaacatgatgagaaaaagaaatacttcgataagcgtgtg
gcaatatacgatttggtatttgaaaccttgataagtattgacgatttagcatctaagaat
acccaagcctctccaccaaataaatattcgcaggaaaataatgagtttactaagctgagg
gaggaaagttatcacaccgctttaacgtatgatgacaagttgttccactatcaattatat
gattggctggtttctcaaaatagtcaagataagttgttacagttggataccgtatttatt
cttccatatttgcaagagaaatctgtatcttccttggaaatatctaacctgttgtgggtt
taccaatctaaaagatccaatttcctatctgctgcccagattttgtactcattatctttt
tctgactttgacataggattaaacactagaatagagtatctttctagagccaatggtttc
tgtaatggtgtttgtcctcctaaccaaagacatcaaatgattcaactgtctagtatggtt
caagaattatttgacgttgcggttgttcaggatgaacttcttgcattggttaagaatgat
tcaagaatcgatgaagagaacaaaaaggaactgataaagcagctaaatggtaagatttta
ccggtcagtgacttatttaatgactttgccgatcctctaggttattatgaggtttgtttg
accattttcaagatttcggactttaggaattacgaagagataatgtccaagtggatggaa
ctcttcgattcactaaaggatgaactgaaatctggaagtaatgatattgacgagagttca
aacttcattaatttgttgtccagtgttgttataaagacaggaaaaagcgtgcgtacgagt
gaatttgttttcccaatatcagatttgcttcctgttatttcaaacctcttttctgaaagt
ttacccaaagaccatgtacaacctggtgctgttgcgtccattttcatatcagctggtgtt
tcctatgacaagctctattatgttttaaaggatttgattgaaacttctgagtccaccaac
actacttacaaaaccgaaattgcttggttaataaaggactggtaccgatcggacaggaag
ttgagagatattattacttatgacgatttgcgcaacttggaagaatatagcattgaaaca
gaccctattgataaatacatgaaaaggactgggaacagcatttag
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