KEGG   Eremothecium cymbalariae: Ecym_4766
Entry
Ecym_4766         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K18664  antiviral helicase SLH1 [EC:5.6.2.6]
Organism
erc  Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:erc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:erc03019]
    Ecym_4766
Enzymes [BR:erc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Ecym_4766
Messenger RNA biogenesis [BR:erc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     Ecym_4766
SSDB
Motif
Pfam: Sec63 DEAD WHD_SNRNP200 ResIII Helicase_C AAA_22 DEXQc_Suv3 AAA_19 PhoH Helicase_PWI UBA_DHX29
Other DBs
NCBI-GeneID: 11471673
NCBI-ProteinID: XP_003646595
UniProt: G8JSQ6
LinkDB
Position
4:complement(1487821..1493679)
AA seq 1952 aa
MSNGYSVHSSGSYMQAMQSMVEVSQTFRLTAKEQELPEIENHKDENKDSSTGILTCLTQD
RNEWDDIFDEFADLSHQKLDELISNKNGPKTVNIFREFFTLMENSGLHVSQESFLEHLMS
ILKSNAEHSHLEQDLFDYLGSENIGLLSFIIQNKEFLARVPLADLNGIREVVFSQSGFLS
ETDIRFQVLANASHAKGQELHEMPKVVRYPHVFRKHELGTSSSFSFGGQKYVLPIGTTRV
SLNSHEEIVIPCSDRKNQYISLADQIKISDLDQVCQTIFDYKTLNMMQSLVYPVAYKTNE
NMLICAPTGAGKTDVALLTILNIINQFSEIDDDQQINIMYDDFKIIYVAPLKALAAEIVE
KFSEKLAPFKIRVRELTGDMQLTKAEIIETQVIVTTPEKWDVVTRKANGDSSLVSKVRLL
IIDEVHLLHEDRGSVIETLVARTLRQVESSQSMIRIVGLSATLPNFIDVADFLGVNRHVG
MFYFDQSFRPKPLEQQLLGCRGKTGSRQGKENIDKVVYKKLFEYASQGHQVMIFVHSRKD
TVKTARTYISMARSNQEADIFVSTEPCVEKFARDMTRHKDKDMKELFQSGFGIHHAGMSR
SDRNLTEKMFKQGAINVLICTATLAWGVNLPADIVIIKGTQVYDSKKGGFTDLGISDVIQ
IFGRAGRPGFGTAHGTGILCTNSDRLDHYVSLITQQHPIESKFGPKMVDNLNAEISLGTV
TNVEEAIQWLGYTYMFVRMKQNPFVYGLDWNELIKDPQLYNKRHEMVVTAVKRLHTLQMI
VFDDISMQFISKDLGRVASDFYLLNESVEIFNQLCKPGVTEADVLAMISVSSEFDSIKFR
EEESNELRKLLENAVQCQVGGTFDTPATKTNILLQSYISQVHIEDSALNSDSNYVAQNST
RICRALFLIGVNRRWGKFAMVMLGICKSIERRMWAFDHPLCQFDLPDTILRRLREKSPNL
EHMLDMEPSELGELVHNNRMGNKLYRVLSCFPLIDITAESFPITTSVMRIRAKLTPKFAW
DYRIHGNAQFFWIFVEESDKSQILHFEKFILNHKHHTATQELDFMIPLSDPLPPQIVIKA
VSDTWMGSESTYAVSFRHLIRPHNETLLTKLLSLRPLPVTALNNELIESIYSFKYFNPMQ
TMTFHTLYNTNENVFVGSPTGSGKTVVAELAMWHAFKEFPGSKIVYIAPMKALVRERVDD
WRRRITPITGDKVVELTGDSIPDPKDVKDASIIITTPEKFDGISRNWQTRRFVQIISLVI
MDEIHLLASDRGPILEMIVSRMNYISSQTKKPVRLLGLSTAVSNAFDLADWLGVKDQGLY
NFPSSVRPVPLKMYIDGFPDNLSFCPLMKTMNKPAFMAILQHSPRKPVLIFVASRRQTRL
TALDIIHLCGMQENPRRFLNIEDEELKYYVSQVSNDTLKLSLQFGIGLHHAGLVEKDREI
SHQLFQMNKIQILVATATLAWGVNLPAHLVIIKGTQFYDAKIEGYRDMDLTDILQMMGRA
GRPSFDTTGTAIIYTKESKKTFYKHFLNVGFPVESSLHKVLADHIGAEVASGTIRDTQEA
LDFINWTFLFRRAHHNPTYYGIIEDTGSVGVNKYLSQLIDSAFDDLIQSQCIVAKENKIK
ATPFLSISAYYYISHKTIRMLLSQIYNGAKFRDVLKWLSMAVEYNELPVRGGEAIMNVEM
SANSRYSVESVFTGKHELPIEDPHVKTFLLLQAYLSRADLAIADYYQDTTSVLDQSLRIL
QAYIDVASELGYFKTVITIIRVMQCIKQGCWYEDNSVTTLPGCTLRRLEGISFSDDGWPL
ENIHEDSTLEILGRMGYKSLESLSKKLLVSEDLKNKFIREASRLPVLDDVHFEQQNKADE
LVLVAKHHNKPSYGFTVCCERFPKLQKEQWFLLAYQDEELMMIKRCQPRRQGKKAIIKCE
LIIPEELHGQTLDFMLINDAMDIKYNLAYSLL
NT seq 5859 nt   +upstreamnt  +downstreamnt
atgagcaatggatattctgtgcactcttcaggttcttacatgcaagcaatgcaatcaatg
gttgaagtttctcaaacttttcgattgactgcaaaagaacaagaactacctgaaatagaa
aaccataaggatgaaaacaaagattcttctacaggaatattaacctgtctaactcaggat
aggaatgaatgggatgatatatttgatgaatttgcagatttatctcaccagaagctggat
gagcttatcagcaataaaaacggaccgaaaaccgttaatatattcagagaattttttacg
ttgatggaaaacagtggactgcatgtgtcccaggagtcatttttggaacatttaatgtcc
attttaaagtctaatgctgaacatagccacttggaacaggatctattcgattatttgggg
tcagaaaacattggtttgctctcttttattatacagaataaggagtttcttgcaagggta
cccctagccgatcttaatggtattcgagaagttgtcttttctcagtctggtttcttgtct
gagacagatattcgttttcaagtattagcaaatgcaagtcatgccaagggtcaagaatta
catgagatgccaaaagttgtacgttatccgcatgtattcagaaagcatgaacttggaaca
tcatcttcattttcctttggtggacagaaatacgtacttccaattggcactactagggtg
tctttaaactcacacgaagagattgtgattccatgttcagatagaaagaatcaatatatc
tcattagcagatcagataaaaataagtgatcttgatcaagtttgtcagacaatatttgac
tataaaaccttgaatatgatgcaatctttagtttatccagttgcatacaaaaccaatgaa
aatatgctaatttgtgcaccaacaggtgctggtaaaacggatgttgcattgcttacaata
ttgaatattataaatcaattttctgaaattgatgatgatcagcaaattaatattatgtat
gatgatttcaagatcatatatgtcgctccattgaaggctttagctgctgagatagttgaa
aagtttagtgaaaagttggccccattcaaaattcgagtacgtgagctaactggtgatatg
caattaacgaaggctgaaataatcgagacacaggttatagttacaaccccagagaaatgg
gatgttgtaacaagaaaggctaatggtgatagtagcttggtttcgaaagttaggctgtta
attattgacgaagttcatttattgcatgaagatagaggttctgttattgaaacgctggtt
gcacgcacactccgtcaggtggaaagttcacaatctatgatacggatagtggggctgtca
gctactttacccaattttatagatgttgcggactttttgggagtaaataggcatgttgga
atgttctactttgatcaatcttttcgaccaaaaccattagaacaacaactgcttggttgt
agaggcaagactggaagccgacagggaaaggaaaatattgataaagtcgtttataaaaag
ctctttgaatatgctagtcaaggacaccaagtgatgatctttgtgcattctagaaaggac
actgtaaagacagctagaacatatatctctatggctcgatctaatcaagaagcggatatc
tttgttagtactgaaccatgcgtggagaagtttgctagagatatgacaagacataaagat
aaggatatgaaagaattgtttcagagtgggtttggtattcatcatgctgggatgtctcgt
tcagatcgtaacttaactgaaaagatgtttaaacagggtgcaatcaacgttttaatttgt
acagcaacattagcatggggtgttaatttgcctgctgacatagttattattaaagggact
caagtatatgattcaaaaaagggaggttttactgatcttggtatttcagatgttatccag
attttcggtcgtgctggtagacctggttttggtactgcacatggtaccggtatcttgtgc
actaatagtgacagattagatcactatgtttcgttgataactcaacaacatcctattgaa
tctaaattcggccctaaaatggttgataatttaaatgctgaaatatctttggggacagtt
actaatgttgaagaagctatccaatggctaggttatacctatatgtttgtacgaatgaaa
caaaatccatttgtatatggtttagattggaacgaattaataaaagatccccaattgtat
aacaaaaggcatgaaatggttgttactgctgtaaaacgattacacacactacagatgatt
gtatttgatgatatttctatgcaattcatttctaaggatttaggtagagttgcttctgat
ttttatcttcttaatgaatcagtagaaatcttcaatcaactctgtaaaccgggtgttact
gaagctgatgttttagcaatgatcagtgttagcagtgaatttgattctattaaatttagg
gaggaagaatcaaatgaacttaggaaattgttggagaatgccgttcaatgccaagtggga
ggcacttttgacacacctgcaacgaaaacaaatatattgttacagtcctacatatcccag
gttcatattgaagattctgcattaaactctgattcgaactatgttgcccagaattcaact
agaatctgtagagcattatttttaattggtgttaatcgaagatggggtaagtttgcaatg
gttatgttgggtatctgcaaatctatagaaaggagaatgtgggctttcgatcatccacta
tgtcagtttgaccttcctgacacaattttacgtcgcctcagagaaaaatcacccaactta
gaacatatgttagacatggaaccatcagaattgggagaacttgttcataacaacagaatg
ggaaacaaattatatcgagttctgagctgtttcccccttattgatataacggcagagagt
tttcccattacgaccagtgtaatgagaattcgtgccaaattaacccccaagttcgcttgg
gattataggatccatggaaatgcccagtttttctggatatttgtcgaagaatcagacaaa
tctcaaatattgcatttcgagaagtttattttaaaccataaacatcacactgctacacag
gagctagattttatgataccattatctgatccactaccacctcagattgttattaaggca
gtatcagatacttggatgggttcggaaagcacatatgcagtatcttttcggcatttgatt
agacctcacaatgagacattattgactaaattattgagtttgcgtccgctacctgttact
gctttgaataatgaattaattgaatcaatttactcatttaagtacttcaatccaatgcaa
accatgacttttcataccttgtataacacaaacgagaatgtttttgttggttcacctaca
ggttctggcaaaacagttgttgctgaattggcgatgtggcacgctttcaaagaatttcca
ggaagcaagattgtgtacattgctccgatgaaagcattagttagggaaagagtggatgat
tggaggagaaggataactccaataacaggtgacaaagttgttgaattgacaggtgattcc
attcctgatcctaaagatgtgaaagatgcatctataataatcacaactcctgagaaattt
gatggtatttcacgtaactggcagacacgtcgatttgttcaaattatttcactagttatt
atggatgaaattcacttactggcaagtgatcgtggcccaattttagaaatgattgtaagc
cgtatgaattacatatcttcgcaaaccaaaaagccagttagactactagggctatctacc
gcagtctccaacgcgtttgatttggcagattggttgggtgtaaaagatcaaggattgtat
aattttccttccagcgttcgtccagttccattaaaaatgtatattgatggatttcctgat
aatctttcattttgtccattgatgaaaactatgaacaagcctgcatttatggccatttta
caacattctccgaggaagcctgttttgatttttgtagcatcaagacgtcaaactagatta
actgcgttagatataatccatttgtgtggcatgcaagaaaatcctcgtaggtttttgaat
attgaagatgaggaattaaaatattatgtgtctcaagtttctaacgacactttaaaattg
tccttacaatttggaatcggcttacatcatgctggtcttgtagagaaggatcgtgagatt
tctcatcaactattccaaatgaacaagatacaaatattggttgcaacagcaactttagcg
tggggcgtgaacttaccagcacatttagttattataaagggaacccaattttatgatgca
aaaattgagggatacagagatatggacttgacagatattttgcagatgatgggaagggca
ggtagaccttcatttgatactacaggaacagctataatctatactaaggaatcaaaaaaa
acgttttacaaacattttttgaatgtgggctttcctgtagagtcttcacttcacaaggtg
ttggctgaccatattggtgccgaagtcgcatcgggtacaattcgtgatacccaagaagcc
ctagattttatcaattggacgtttttatttaggcgggctcatcataatcctacgtattat
ggtataattgaagatacgggttcagttggggtcaacaagtatttaagtcagttaatcgac
agcgcttttgatgatttaatccagtctcaatgtattgtggccaaggaaaataaaataaag
gcaactccatttttgagcatatctgcttactattatatctctcataagaccataagaatg
cttctatctcagatatataatggagcaaagttcagggacgtcttgaaatggttgtcgatg
gcagtcgaatacaatgaacttccagttagaggaggagaggctattatgaatgtcgaaatg
tcagccaactctcggtactctgtagagagtgtttttactggtaaacatgaacttcctata
gaggatcctcatgtaaaaacatttttattattgcaagcatatctcagccgcgcagacttg
gcaatcgcggattattatcaagatacaacttctgttttggaccagtctttgcgtattctt
caagcttacattgatgtagctagcgaattaggatacttcaaaacagttataacaataatt
agagtaatgcagtgcattaagcaaggttgctggtatgaggataattccgtgacaacattg
cctggctgcaccttgagacgtttggaaggcatcagctttagcgatgatgggtggccttta
gaaaatattcatgaagactctactctagaaattttgggtagaatgggatataaatcactg
gaatctttgtctaagaagctattggtatctgaggacttgaagaataaatttattcgcgag
gcttcgagattaccagtactagatgacgtccattttgagcagcaaaataaggctgatgaa
ttagtattagttgcaaaacatcataataagcctagctatgggtttactgtatgctgtgaa
agatttcctaaattacaaaaggaacaatggttcttactcgcttatcaggatgaagagtta
atgatgatcaaaaggtgtcagccaagaaggcaaggcaaaaaggcaataatcaagtgtgag
cttattataccagaggaattacatggccaaactctggattttatgttaatcaatgatgct
atggatattaagtacaatttagcctatagtctgctatga

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