Eremothecium cymbalariae: Ecym_4766
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Entry
Ecym_4766 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_4766
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Ecym_4766
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Ecym_4766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_19
PhoH
Helicase_PWI
UBA_DHX29
Motif
Other DBs
NCBI-GeneID:
11471673
NCBI-ProteinID:
XP_003646595
UniProt:
G8JSQ6
LinkDB
All DBs
Position
4:complement(1487821..1493679)
Genome browser
AA seq
1952 aa
AA seq
DB search
MSNGYSVHSSGSYMQAMQSMVEVSQTFRLTAKEQELPEIENHKDENKDSSTGILTCLTQD
RNEWDDIFDEFADLSHQKLDELISNKNGPKTVNIFREFFTLMENSGLHVSQESFLEHLMS
ILKSNAEHSHLEQDLFDYLGSENIGLLSFIIQNKEFLARVPLADLNGIREVVFSQSGFLS
ETDIRFQVLANASHAKGQELHEMPKVVRYPHVFRKHELGTSSSFSFGGQKYVLPIGTTRV
SLNSHEEIVIPCSDRKNQYISLADQIKISDLDQVCQTIFDYKTLNMMQSLVYPVAYKTNE
NMLICAPTGAGKTDVALLTILNIINQFSEIDDDQQINIMYDDFKIIYVAPLKALAAEIVE
KFSEKLAPFKIRVRELTGDMQLTKAEIIETQVIVTTPEKWDVVTRKANGDSSLVSKVRLL
IIDEVHLLHEDRGSVIETLVARTLRQVESSQSMIRIVGLSATLPNFIDVADFLGVNRHVG
MFYFDQSFRPKPLEQQLLGCRGKTGSRQGKENIDKVVYKKLFEYASQGHQVMIFVHSRKD
TVKTARTYISMARSNQEADIFVSTEPCVEKFARDMTRHKDKDMKELFQSGFGIHHAGMSR
SDRNLTEKMFKQGAINVLICTATLAWGVNLPADIVIIKGTQVYDSKKGGFTDLGISDVIQ
IFGRAGRPGFGTAHGTGILCTNSDRLDHYVSLITQQHPIESKFGPKMVDNLNAEISLGTV
TNVEEAIQWLGYTYMFVRMKQNPFVYGLDWNELIKDPQLYNKRHEMVVTAVKRLHTLQMI
VFDDISMQFISKDLGRVASDFYLLNESVEIFNQLCKPGVTEADVLAMISVSSEFDSIKFR
EEESNELRKLLENAVQCQVGGTFDTPATKTNILLQSYISQVHIEDSALNSDSNYVAQNST
RICRALFLIGVNRRWGKFAMVMLGICKSIERRMWAFDHPLCQFDLPDTILRRLREKSPNL
EHMLDMEPSELGELVHNNRMGNKLYRVLSCFPLIDITAESFPITTSVMRIRAKLTPKFAW
DYRIHGNAQFFWIFVEESDKSQILHFEKFILNHKHHTATQELDFMIPLSDPLPPQIVIKA
VSDTWMGSESTYAVSFRHLIRPHNETLLTKLLSLRPLPVTALNNELIESIYSFKYFNPMQ
TMTFHTLYNTNENVFVGSPTGSGKTVVAELAMWHAFKEFPGSKIVYIAPMKALVRERVDD
WRRRITPITGDKVVELTGDSIPDPKDVKDASIIITTPEKFDGISRNWQTRRFVQIISLVI
MDEIHLLASDRGPILEMIVSRMNYISSQTKKPVRLLGLSTAVSNAFDLADWLGVKDQGLY
NFPSSVRPVPLKMYIDGFPDNLSFCPLMKTMNKPAFMAILQHSPRKPVLIFVASRRQTRL
TALDIIHLCGMQENPRRFLNIEDEELKYYVSQVSNDTLKLSLQFGIGLHHAGLVEKDREI
SHQLFQMNKIQILVATATLAWGVNLPAHLVIIKGTQFYDAKIEGYRDMDLTDILQMMGRA
GRPSFDTTGTAIIYTKESKKTFYKHFLNVGFPVESSLHKVLADHIGAEVASGTIRDTQEA
LDFINWTFLFRRAHHNPTYYGIIEDTGSVGVNKYLSQLIDSAFDDLIQSQCIVAKENKIK
ATPFLSISAYYYISHKTIRMLLSQIYNGAKFRDVLKWLSMAVEYNELPVRGGEAIMNVEM
SANSRYSVESVFTGKHELPIEDPHVKTFLLLQAYLSRADLAIADYYQDTTSVLDQSLRIL
QAYIDVASELGYFKTVITIIRVMQCIKQGCWYEDNSVTTLPGCTLRRLEGISFSDDGWPL
ENIHEDSTLEILGRMGYKSLESLSKKLLVSEDLKNKFIREASRLPVLDDVHFEQQNKADE
LVLVAKHHNKPSYGFTVCCERFPKLQKEQWFLLAYQDEELMMIKRCQPRRQGKKAIIKCE
LIIPEELHGQTLDFMLINDAMDIKYNLAYSLL
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatggatattctgtgcactcttcaggttcttacatgcaagcaatgcaatcaatg
gttgaagtttctcaaacttttcgattgactgcaaaagaacaagaactacctgaaatagaa
aaccataaggatgaaaacaaagattcttctacaggaatattaacctgtctaactcaggat
aggaatgaatgggatgatatatttgatgaatttgcagatttatctcaccagaagctggat
gagcttatcagcaataaaaacggaccgaaaaccgttaatatattcagagaattttttacg
ttgatggaaaacagtggactgcatgtgtcccaggagtcatttttggaacatttaatgtcc
attttaaagtctaatgctgaacatagccacttggaacaggatctattcgattatttgggg
tcagaaaacattggtttgctctcttttattatacagaataaggagtttcttgcaagggta
cccctagccgatcttaatggtattcgagaagttgtcttttctcagtctggtttcttgtct
gagacagatattcgttttcaagtattagcaaatgcaagtcatgccaagggtcaagaatta
catgagatgccaaaagttgtacgttatccgcatgtattcagaaagcatgaacttggaaca
tcatcttcattttcctttggtggacagaaatacgtacttccaattggcactactagggtg
tctttaaactcacacgaagagattgtgattccatgttcagatagaaagaatcaatatatc
tcattagcagatcagataaaaataagtgatcttgatcaagtttgtcagacaatatttgac
tataaaaccttgaatatgatgcaatctttagtttatccagttgcatacaaaaccaatgaa
aatatgctaatttgtgcaccaacaggtgctggtaaaacggatgttgcattgcttacaata
ttgaatattataaatcaattttctgaaattgatgatgatcagcaaattaatattatgtat
gatgatttcaagatcatatatgtcgctccattgaaggctttagctgctgagatagttgaa
aagtttagtgaaaagttggccccattcaaaattcgagtacgtgagctaactggtgatatg
caattaacgaaggctgaaataatcgagacacaggttatagttacaaccccagagaaatgg
gatgttgtaacaagaaaggctaatggtgatagtagcttggtttcgaaagttaggctgtta
attattgacgaagttcatttattgcatgaagatagaggttctgttattgaaacgctggtt
gcacgcacactccgtcaggtggaaagttcacaatctatgatacggatagtggggctgtca
gctactttacccaattttatagatgttgcggactttttgggagtaaataggcatgttgga
atgttctactttgatcaatcttttcgaccaaaaccattagaacaacaactgcttggttgt
agaggcaagactggaagccgacagggaaaggaaaatattgataaagtcgtttataaaaag
ctctttgaatatgctagtcaaggacaccaagtgatgatctttgtgcattctagaaaggac
actgtaaagacagctagaacatatatctctatggctcgatctaatcaagaagcggatatc
tttgttagtactgaaccatgcgtggagaagtttgctagagatatgacaagacataaagat
aaggatatgaaagaattgtttcagagtgggtttggtattcatcatgctgggatgtctcgt
tcagatcgtaacttaactgaaaagatgtttaaacagggtgcaatcaacgttttaatttgt
acagcaacattagcatggggtgttaatttgcctgctgacatagttattattaaagggact
caagtatatgattcaaaaaagggaggttttactgatcttggtatttcagatgttatccag
attttcggtcgtgctggtagacctggttttggtactgcacatggtaccggtatcttgtgc
actaatagtgacagattagatcactatgtttcgttgataactcaacaacatcctattgaa
tctaaattcggccctaaaatggttgataatttaaatgctgaaatatctttggggacagtt
actaatgttgaagaagctatccaatggctaggttatacctatatgtttgtacgaatgaaa
caaaatccatttgtatatggtttagattggaacgaattaataaaagatccccaattgtat
aacaaaaggcatgaaatggttgttactgctgtaaaacgattacacacactacagatgatt
gtatttgatgatatttctatgcaattcatttctaaggatttaggtagagttgcttctgat
ttttatcttcttaatgaatcagtagaaatcttcaatcaactctgtaaaccgggtgttact
gaagctgatgttttagcaatgatcagtgttagcagtgaatttgattctattaaatttagg
gaggaagaatcaaatgaacttaggaaattgttggagaatgccgttcaatgccaagtggga
ggcacttttgacacacctgcaacgaaaacaaatatattgttacagtcctacatatcccag
gttcatattgaagattctgcattaaactctgattcgaactatgttgcccagaattcaact
agaatctgtagagcattatttttaattggtgttaatcgaagatggggtaagtttgcaatg
gttatgttgggtatctgcaaatctatagaaaggagaatgtgggctttcgatcatccacta
tgtcagtttgaccttcctgacacaattttacgtcgcctcagagaaaaatcacccaactta
gaacatatgttagacatggaaccatcagaattgggagaacttgttcataacaacagaatg
ggaaacaaattatatcgagttctgagctgtttcccccttattgatataacggcagagagt
tttcccattacgaccagtgtaatgagaattcgtgccaaattaacccccaagttcgcttgg
gattataggatccatggaaatgcccagtttttctggatatttgtcgaagaatcagacaaa
tctcaaatattgcatttcgagaagtttattttaaaccataaacatcacactgctacacag
gagctagattttatgataccattatctgatccactaccacctcagattgttattaaggca
gtatcagatacttggatgggttcggaaagcacatatgcagtatcttttcggcatttgatt
agacctcacaatgagacattattgactaaattattgagtttgcgtccgctacctgttact
gctttgaataatgaattaattgaatcaatttactcatttaagtacttcaatccaatgcaa
accatgacttttcataccttgtataacacaaacgagaatgtttttgttggttcacctaca
ggttctggcaaaacagttgttgctgaattggcgatgtggcacgctttcaaagaatttcca
ggaagcaagattgtgtacattgctccgatgaaagcattagttagggaaagagtggatgat
tggaggagaaggataactccaataacaggtgacaaagttgttgaattgacaggtgattcc
attcctgatcctaaagatgtgaaagatgcatctataataatcacaactcctgagaaattt
gatggtatttcacgtaactggcagacacgtcgatttgttcaaattatttcactagttatt
atggatgaaattcacttactggcaagtgatcgtggcccaattttagaaatgattgtaagc
cgtatgaattacatatcttcgcaaaccaaaaagccagttagactactagggctatctacc
gcagtctccaacgcgtttgatttggcagattggttgggtgtaaaagatcaaggattgtat
aattttccttccagcgttcgtccagttccattaaaaatgtatattgatggatttcctgat
aatctttcattttgtccattgatgaaaactatgaacaagcctgcatttatggccatttta
caacattctccgaggaagcctgttttgatttttgtagcatcaagacgtcaaactagatta
actgcgttagatataatccatttgtgtggcatgcaagaaaatcctcgtaggtttttgaat
attgaagatgaggaattaaaatattatgtgtctcaagtttctaacgacactttaaaattg
tccttacaatttggaatcggcttacatcatgctggtcttgtagagaaggatcgtgagatt
tctcatcaactattccaaatgaacaagatacaaatattggttgcaacagcaactttagcg
tggggcgtgaacttaccagcacatttagttattataaagggaacccaattttatgatgca
aaaattgagggatacagagatatggacttgacagatattttgcagatgatgggaagggca
ggtagaccttcatttgatactacaggaacagctataatctatactaaggaatcaaaaaaa
acgttttacaaacattttttgaatgtgggctttcctgtagagtcttcacttcacaaggtg
ttggctgaccatattggtgccgaagtcgcatcgggtacaattcgtgatacccaagaagcc
ctagattttatcaattggacgtttttatttaggcgggctcatcataatcctacgtattat
ggtataattgaagatacgggttcagttggggtcaacaagtatttaagtcagttaatcgac
agcgcttttgatgatttaatccagtctcaatgtattgtggccaaggaaaataaaataaag
gcaactccatttttgagcatatctgcttactattatatctctcataagaccataagaatg
cttctatctcagatatataatggagcaaagttcagggacgtcttgaaatggttgtcgatg
gcagtcgaatacaatgaacttccagttagaggaggagaggctattatgaatgtcgaaatg
tcagccaactctcggtactctgtagagagtgtttttactggtaaacatgaacttcctata
gaggatcctcatgtaaaaacatttttattattgcaagcatatctcagccgcgcagacttg
gcaatcgcggattattatcaagatacaacttctgttttggaccagtctttgcgtattctt
caagcttacattgatgtagctagcgaattaggatacttcaaaacagttataacaataatt
agagtaatgcagtgcattaagcaaggttgctggtatgaggataattccgtgacaacattg
cctggctgcaccttgagacgtttggaaggcatcagctttagcgatgatgggtggccttta
gaaaatattcatgaagactctactctagaaattttgggtagaatgggatataaatcactg
gaatctttgtctaagaagctattggtatctgaggacttgaagaataaatttattcgcgag
gcttcgagattaccagtactagatgacgtccattttgagcagcaaaataaggctgatgaa
ttagtattagttgcaaaacatcataataagcctagctatgggtttactgtatgctgtgaa
agatttcctaaattacaaaaggaacaatggttcttactcgcttatcaggatgaagagtta
atgatgatcaaaaggtgtcagccaagaaggcaaggcaaaaaggcaataatcaagtgtgag
cttattataccagaggaattacatggccaaactctggattttatgttaatcaatgatgct
atggatattaagtacaatttagcctatagtctgctatga
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