Eremothecium cymbalariae: Ecym_4775
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Entry
Ecym_4775 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
erc
Eremothecium cymbalariae
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
erc03041
]
Ecym_4775
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_4775
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ecym_4775
Spliceosome [BR:
erc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Ecym_4775
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
90S particles
Helicases
Ecym_4775
Pre-60S particles
Ecym_4775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
11471676
NCBI-ProteinID:
XP_003646604
UniProt:
G8JSR5
LinkDB
All DBs
Position
4:1507889..1509391
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AA seq
500 aa
AA seq
DB search
MATPDSRVEVEVDSKKRPSSDDEIADNMGSETKAVEKFDELGLSKQTLKAIEKMGFTTMT
QVQAKTIPPLMAGRDVLGAAKTGSGKTLAFLIPAIEMLHSLKFKPRNGTGVIVITPTREL
ALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLSKGVNLIIATPGRLLDHLQNTKGFI
FKNLKALIIDEADRILEIGFEDEMKQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPG
PLFINVDSEKETSTVDGLEQGYVVCESDKRFLLLFTFLKKFQTKKIIVFLSSCNSVRYYA
ELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAQRGILVCTDVAARGLDIPAVDWIIQFDP
PDDPRDYIHRVGRTARGTKGKGKSLMFLTPNELGFLRYLKAAKVPLNEYEFPANKIANVQ
SQLEKLLKTNYELNRIAKDGYRSYLQAYASHSLKTVYQIDKLDLVKVAKSYGFSVPPKVN
ITIGASGKTPTNKKRKVSNH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctactccggactccagggttgaggttgaagttgattctaaaaagcgtccaagttct
gatgatgaaattgcggacaatatgggctcagaaaccaaggcggttgaaaagtttgatgaa
cttggtctatccaaacagactttgaaggctattgagaagatgggatttacgactatgaca
caagtccaagccaagactattccaccattaatggcaggtagggacgtgcttggtgcggca
aaaacaggatcgggtaagacgctagcgttcctaattcctgctattgaaatgttgcactct
ttgaaattcaagccaaggaatgggactggtgtcattgtgattacaccaacgagggaactg
gctctacaaatatttggcgtagcacgagagctaatggaatttcactcccaaacatttggt
atcgtaattggtggtgccaaccgtagacaggaagctgaaaagctttcgaagggtgtgaac
ttgattattgctacaccaggacgtcttttagaccatcttcagaacaccaaaggatttata
ttcaagaacttgaaagcactaattatcgatgaagcggaccgtattctagagattggtttt
gaggatgaaatgaaacaaattattaagattcttccaaacgaggataggcaatccatgtta
ttctctgccacacaaacgaccaaagttgaagacttggctcgtatttctctgagaccagga
cctttgtttattaatgtggattcggagaaagaaacatccacagtagatggattagagcag
ggctatgtggtatgtgagagtgataaacgtttcttgttgctgttcacttttttgaagaag
ttccaaaccaagaaaattattgtatttctatcatcctgtaactcagtgagatattatgct
gagcttttgaactacattgacctgcccgttttggaactacacggtaaacaaaaacaacaa
aaaagaactaatacattctttgaattctgtaatgctcaacgtggaatcctggtctgtacg
gatgttgccgcaagaggattagacatcccagcggttgattggatcattcaatttgacccc
ccagatgacccaagggattatattcacagggttggtagaaccgcaagaggcacgaagggt
aaagggaaatctcttatgttcttgacacccaatgaactcggtttcttacgctatttaaaa
gctgcaaaagttccattaaatgaatacgaatttccagctaacaaaattgctaatgtacag
tcccaattggaaaagctgttaaagaccaattatgaattaaacaggattgcgaaggatggt
tacagatcctacctacaagcttatgcttcccattctttgaaaactgtctatcaaatagat
aagctggatctagtgaaggttgctaaatcttatgggttctcagttccaccaaaggtgaac
attacaattggcgctagcggtaaaacacctactaacaaaaagaggaaggtttccaaccat
taa
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