KEGG   Eremothecium cymbalariae: Ecym_5193
Entry
Ecym_5193         CDS       T02237                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
erc  Eremothecium cymbalariae
Pathway
erc03020  RNA polymerase
erc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Ecym_5193
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ecym_5193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:erc03021]
    Ecym_5193
   03400 DNA repair and recombination proteins [BR:erc03400]
    Ecym_5193
Transcription machinery [BR:erc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Ecym_5193
DNA repair and recombination proteins [BR:erc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Ecym_5193
SSDB
Motif
Pfam: RNA_pol_Rpb4 Spo16_C
Other DBs
NCBI-GeneID: 11470704
NCBI-ProteinID: XP_003646781
UniProt: I6ND22
LinkDB
Position
5:402334..402924
AA seq 196 aa
MNISTSTILTKRHGLKKVIEEENAATLQLGEEFQLKQINHQGQEEDLIALNLSEARLVIK
EALQHRRQLFKKWNHQDAIDVDDEQDQDLHNQTQEKELQSIDKLLEKTTGGQNQALKQTM
IYLTNFSRFRDQETVTAVTQLLQSTGLHPFEVAQLGSLSCEDADEAKTLIPSLNNKISDE
DLERILKELSNLETLY
NT seq 591 nt   +upstreamnt  +downstreamnt
atgaatatttctacttcaactattttgaccaagagacatggtttgaaaaaggtaatagag
gaggagaatgccgcaacgttgcagttaggagaagaatttcaattaaagcaaataaaccac
cagggtcaagaagaggatcttattgcgttgaatttgagtgaagctaggttggtgattaag
gaagcgttgcagcatcgcagacagttgtttaaaaagtggaaccatcaggatgcgattgat
gtggatgacgagcaagatcaggacctgcacaatcaaacacaggagaaagagttacagtcg
atagataaactgctggagaagacaactggcggtcaaaaccaggcgttaaaacagactatg
atttatttgacgaatttttctcgtttcagggaccaggagacagtgacggcagtgacacag
ttactgcagtcaactgggctgcatccgtttgaggttgcccagctaggctctttatcatgt
gaagatgcggatgaggccaagactctgattcctagtctgaataacaagatttcggatgaa
gatcttgagaggattttgaaggaattatcgaatttagagacgttgtattga

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