Eremothecium cymbalariae: Ecym_5422
Help
Entry
Ecym_5422 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
erc
Eremothecium cymbalariae
Pathway
erc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Ecym_5422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
erc03041
]
Ecym_5422
03009 Ribosome biogenesis [BR:
erc03009
]
Ecym_5422
Enzymes [BR:
erc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ecym_5422
Spliceosome [BR:
erc03041
]
Complex A
U1 snRNP components
U1 related factors
Ecym_5422
Complex B
Ecym_5422
Ribosome biogenesis [BR:
erc03009
]
Eukaryotic type
Pre-60S particles
Helicases
Ecym_5422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
11468489
NCBI-ProteinID:
XP_003646993
UniProt:
I6NDN4
LinkDB
All DBs
Position
5:complement(join(868686..869065,869897..871199))
Genome browser
AA seq
560 aa
AA seq
DB search
MEMTYGNRDQQQFNRNGQGARGGGDSWSNRGGDGNSYGGRNGNFGGRGGGRGGYGGRGRG
GRVQDDRVELSKPDWDLESLPRFEKNFYVEHEDVRNMSSADVEDFRKKSEMTIIGHDVPK
PIRTFDEAGFPEYVLKEVKEEGFDKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLP
GIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPKSQQI
RDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRP
DRQTLMWSATWPKEVQQLARDYLHDPIQVNIGSLELAASHTITQIVEVISDFEKRDRLVK
HLDIASKDPESKIIIFASTKRTCDDITSYLRQDGWPALAIHGDKQQQERDWVLNEFRCGR
SPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQSKA
LGAQLISIMREAKQEIPQDLLVYDRAPRGSHPRYGGRGGYGGRGGRGRGGYGGRGGYGGR
GGGGYGGYSKPRDGGWGNRG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgacgtacggtaacagagatcaacagcagtttaatagaaatggccagggagcg
cgtggtggcggcgacagctggtctaatagaggtggtgacggtaattcatatggtggtaga
aatggtaattttggcggtagaggaggaggccgtggcggatatggaggccgtggacgtggt
ggaagggttcaggatgaccgtgttgagttaagcaagcctgattgggatttggaatcgttg
ccgaggtttgaaaagaatttttatgtagagcacgaggatgtgcggaacatgagcagcgct
gacgttgaagattttagaaagaagagtgagatgacgattattgggcatgatgtgcctaag
ccgatcaggacgttcgatgaggctgggtttcctgagtatgtgttgaaggaggtgaaagag
gaggggtttgataagcctacggcgattcagtgtcagggttggccgatggcgttatctggt
cgtgatatgattggtgttgctgctaccggttctggtaagacattgtcgtattgtttgccg
ggtattgtgcatattaatgcacagcctttgttgtctccaggtgacggtccgattgttttg
gtgttggctcctactagagagttggcagttcagattcagaaggagtgctcgaaatttggc
cactcttcgcgtattaggaacacctgtgtttacgggggtgtgcctaagtctcagcagatc
agggatttacagaggggtgtagagatcctcattgctacaccgggcagattgatcgatatg
ttggaaattggtaaaaccaacttgaagagagttacttatttagttttggacgaggcggac
agaatgttggatatgggttttgagccgcagatcaggaaaatcgttgatcagatcagaccc
gacaggcaaaccctaatgtggtctgctacatggcccaaggaagttcaacagttggctagg
gattacttgcatgatcctatccaagtaaatattggttctttggaattagctgcctctcac
acaattacccaaatcgttgaggttattagtgactttgaaaagagagacagattggttaag
cacttggatatcgcttctaaagatccagaatcaaaaataattatctttgcttcgacaaag
agaacttgtgacgatattacttcgtatttaaggcaagatgggtggcctgctctagctatt
catggtgataagcagcaacaggaacgtgactgggttttgaacgaattcagatgcggccgt
tcgccaattatggtcgctactgatgttgcagccaggggtattgacgtgaaaggtattaac
tttgtcatcaactatgatatgcctggtaatatagaagactatgtgcacagaatcggtagg
acgggtagagcaggtgctactggtactgcaatttcttttttcactgagcaaagcaaagca
ttgggcgcacagttgatctccattatgagagaagccaagcaagagatccctcaagatttg
ttggtctatgatcgtgctcctcgtggatctcatccaagatatggtggccgtggtggctac
ggtggtcgtggtggccgaggccgtggtggttatggtggtcgcggtggatacggtggccgt
ggtggtggcggctacggtggttattcaaaacccagagacggtggttggggtaacagaggt
taa
DBGET
integrated database retrieval system
